Gene P9303_04251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_04251 
Symbol 
ID4778967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp424699 
End bp425556 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content53% 
IMG OID640085929 
ProductABC transporter solute-binding protein 
Protein accessionYP_001016442 
Protein GI124022135 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCTCTT TATTCGCATT AGCTGCCTTA ACAGCCCAGC CAGTCTCAGC AGAGACCTCC 
ATGGAGTCGG TTGTACGCAG TGGCAAGCTG AACGCGGTAG TCATTGGTGA CGAGCTGCCT
TTTGCTAGCA AGAGCGACGC CGGCTTCAAG GGCCTAGCAA TCGATGTTGT TGCAGCTGTC
AAAAATGAAC TTCAGGCATT TGCAGGCAAG CCGATCAGGC TTAATGCCTT ACAGGTGAAC
TCAGTACAGG ACGCAAAAGA TGCCCTGCTG AGCGGCAAAG CAGACATCGC CTGTGGTGTT
TCCTACTCCT GGGAAAGAGC AATGCTTGTT GACTACACCA TCCCGTTTGC CTTGGGCGGG
GTGAGGGTAC TAGCTCCTAC CGGCAATGAT GGCACTCCCG CATCTCTTGC AGGCAAGACA
GTTGGGGTCA TTAAAGACAC CGTTGCTGCA CAAACTCTCG AAACAGCAGC CCCACAAGCG
AATTACGTCT CCTACGACTC TCCAGCAGCA GCTCTTGCCG CCATGCGCTC TGGCTCTGTT
GACATCCTCG GTGGAGACAG TCTCTGGCTC AAAGCCAATA AAGCCAGGGT GGCAGCAAAC
GCCGATATCG TGCCAATCGT TCCATACGGC CGCTCAGCTG TCGGCTGCAT CATTCCAGAA
AACAACTCCA CAATGCTGAA TTACAGCAAC ATCGCCATCG GCAAGATCTT GCAGGGCTAT
GTGAATGATG TTGCCCCTGT TCAAGCCATG GTCAATCGCT GGATTGGTCC AGGAAGTGCC
GTTAACCTCA AGCAAGACTT GATCAAGACC TACTACGCCA CAGTCTTATC TACCGCTGCT
CAACTATCTT TGCGTTGA
 
Protein sequence
MGSLFALAAL TAQPVSAETS MESVVRSGKL NAVVIGDELP FASKSDAGFK GLAIDVVAAV 
KNELQAFAGK PIRLNALQVN SVQDAKDALL SGKADIACGV SYSWERAMLV DYTIPFALGG
VRVLAPTGND GTPASLAGKT VGVIKDTVAA QTLETAAPQA NYVSYDSPAA ALAAMRSGSV
DILGGDSLWL KANKARVAAN ADIVPIVPYG RSAVGCIIPE NNSTMLNYSN IAIGKILQGY
VNDVAPVQAM VNRWIGPGSA VNLKQDLIKT YYATVLSTAA QLSLR