Gene P9303_01181 details

Gene Information

• Locus tag: P9303_01181
• Symbol: rfbB
• ID: 4778563
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 118285
• End bp: 119379
• Gene Length: 1095 bp
• Protein Length: 364 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640085617
• Product: dTDP-D-glucose 4,6-dehydratase
• Protein accession: YP_001016138
• Protein GI: 124021831
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1088] dTDP-D-glucose 4,6-dehydratase
• TIGRFAM ID: [TIGR01181] dTDP-glucose 4,6-dehydratase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.683798
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCACTG AAATCCCAGA ATACTTCTCG AGGGTTCTTG TTACAGGAGG AGCTGGTTTT 
ATAGGCGGAG CCCTCATAAA ACGGTTGCTT AAGGAATCAA ATATGATTAT TTTTAACCTT 
GATAAATTCT CTTACGCTAG CGACCACACC TCCATCTATC ATACCTTAGA TAAACTTGAC 
AAGTTAGCTT CTCAACGTTA TAAGCCACTG CAGGTAGACT TAAGTGATCC GCTGTCCACT 
CAAGCAGCCG TTTGTGAAGC TGACCCTGAT CTTGTCTTTC ATTTAGCAGC TGAGAGCCAT 
GTAGACAGGT CTATCAATAA CCCCCGCATT TTTTTCGAAA GTAATGTTGA AGGCACATTC 
AACTTATTGG AGTCATTACG CTCCCATTAT GCTGAGCTTT CAAAAGAACG ACGAGCTCGT 
TTTCGCCTCC TTCACATCAG TACTGATGAG GTTTTTGGAT CATTAGGTGA TCAGGGCTTT 
TTCTGTGAAA CTTCGCCTTA CCAACCACGC AGTCCTTATT CTGCTACCAA GGCTGCAAGT 
GACCATCTAG TTCAAGCTTG GATTCACACA TATGGTCTAC CTGCCATAAT CACAAATTGT 
ACCAATAATT ATGGACCTTA TCAATTCCCT GAAAAGTTGA TACCACTCGT CATTTTAAAA 
ATGATTAATA ATGAAGACAT TCCAATTTAT GGAAACGGTA AAAATGTTCG TGATTGGTTA 
TTTGTCGAGG ACCATATAGA TGCACTTCTT CTCGTTGCCA GCAATGGCTT AATAGGTAAT 
CGTTATTGCA TAGGTGGTAC TTCCGAACGA ACAAATAAGC AGGTAGTAGA GTCAATAAGT 
ATAATTATGG ATAAATTACA TCCTATCGGA GTACCTCATA TACAAAAGAT TAAATATGTC 
GATGATCGAC CTGGCCATGA TTTAAGGTAC GCTATGGATA TTAATCATAT TAAAACTCAG 
CTCGGGTGGA AACCTACCTT TTTATTCAAT GTTGGCTTGG AAATTACTGT GAAATGGTAC 
CTAGATCACT TGGCTTGGGT CAAGCATGTA GCTAAAACAT CTTCCTATCA AGGTGAGCGT 
CTAGGTCTTA TCTAA 

 

Protein sequence

MSTEIPEYFS RVLVTGGAGF IGGALIKRLL KESNMIIFNL DKFSYASDHT SIYHTLDKLD 
KLASQRYKPL QVDLSDPLST QAAVCEADPD LVFHLAAESH VDRSINNPRI FFESNVEGTF 
NLLESLRSHY AELSKERRAR FRLLHISTDE VFGSLGDQGF FCETSPYQPR SPYSATKAAS 
DHLVQAWIHT YGLPAIITNC TNNYGPYQFP EKLIPLVILK MINNEDIPIY GNGKNVRDWL 
FVEDHIDALL LVASNGLIGN RYCIGGTSER TNKQVVESIS IIMDKLHPIG VPHIQKIKYV 
DDRPGHDLRY AMDINHIKTQ LGWKPTFLFN VGLEITVKWY LDHLAWVKHV AKTSSYQGER 
LGLI