Gene P9303_00141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_00141 
Symbol 
ID4775971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand- 
Start bp17882 
End bp18886 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content54% 
IMG OID640085513 
ProducttRNA-dihydrouridine synthase A 
Protein accessionYP_001016036 
Protein GI124021729 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00742] tRNA dihydrouridine synthase A 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTTC CTTTCACGCC ACAGGTTGAT GGTGCTTATC GGTTCAGCGT GGCTCCAATG 
CTCGACTGCA CAGATCGACA CTTCAGGGTA CTAATGCGAC AAATCAGTCG CCGGGCGTTG 
CTTTACACGG AAATGTTGGT TGCCCAAGCT CTGCATCACA GCAACCGTCT TGATCATCTG 
CTCGATTTCG ACATCATCGA GCATCCCCTG TCTCTACAAG TAGGGGGCGA TGATCCAAAA 
ATGCTTGCAG AAGCAGCGCG CCTGGCCGAT GCCTGGGGCT ACGACGAAAT CAACCTCAAC 
GTGGGATGTC CCAGCTCAAG AGCAAAAGCA GGCAACTTCG GTGCCTGCCT AATGGCTAAA 
CCTGATCAAG TCGCACGTTG TGTTGAAGCG ATGGCGATGG CGAGCCCTCT TCCAGTCACC 
GTGAAACACC GTCTAGGAAT TGATGATTTC GATAGCGACG CTCTACTCAT GACCTTTGTC 
GACCGAGTGT CCCTCGCAGG AGCCACTCGC TTTACTGTGC ATGCACGAAA AGCCTGGCTA 
GAAGGGCTTG ACCCCAAACA AAACCGCACG ATTCCACCAC TTCAACATCA ACGAGTCACC 
CATCTCAAGC AACAACGCCC GCAGCTCACT ATTGAAATCA ATGGAGGACT AGAACACCCT 
GCCGACTGCC TAACAGCGCT GCAAACCTGT GATGGGGCAA TGGTGGGGCG AGCAGCGTAT 
GCGCATCCGC TCCGCTGGAA GAGCATGGAT GAGCTGGTCT ATGGAGAAGA ACCACGCTCA 
ATCAATGCTT CTCAAGTCAT AGGAGGATTA CTCCCTCATG CCGAAACCCA CCTGAGCCGA 
GGTGGCCGGC TATGGGATCT TTGCCGACAT CTTTTACAAC TCGTTGAAGG GGTACCGGGC 
GCCAAATCCT GGAGGCGAGA CCTTGGCATC AAGGCTCAAA AAGCCGATGC CGATCTAACA 
GTGCTGCAAA AAGCAGCCCA GCAACTTGAA GATGCCGGGC TATAA
 
Protein sequence
MIVPFTPQVD GAYRFSVAPM LDCTDRHFRV LMRQISRRAL LYTEMLVAQA LHHSNRLDHL 
LDFDIIEHPL SLQVGGDDPK MLAEAARLAD AWGYDEINLN VGCPSSRAKA GNFGACLMAK 
PDQVARCVEA MAMASPLPVT VKHRLGIDDF DSDALLMTFV DRVSLAGATR FTVHARKAWL 
EGLDPKQNRT IPPLQHQRVT HLKQQRPQLT IEINGGLEHP ADCLTALQTC DGAMVGRAAY 
AHPLRWKSMD ELVYGEEPRS INASQVIGGL LPHAETHLSR GGRLWDLCRH LLQLVEGVPG 
AKSWRRDLGI KAQKADADLT VLQKAAQQLE DAGL