Gene NATL1_20931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_20931 
Symbol 
ID4779134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1734806 
End bp1735603 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content27% 
IMG OID640085389 
Producthypothetical protein 
Protein accessionYP_001015913 
Protein GI124026798 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.129614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.872468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTA TCGTAAAAAT GTTGTTGGAT AATTTTAAAC TTGCTTTTAA AACTAGAAGA 
GCTTGGTGGT ATACAGCTAG CTCTAGGTCA AGAGCTAGGT TTGCAAGAAC TACATTAGGA
AGTTTTTGGT TAGGTTTCTC AAATTTATTA TCCATCGGAA CTTTAGGTAT TGTCTATGGA
ACAGTCTTTT CAGTCGCAGA TTTTAAGTCT TATTTTATAT ATTTAGGATT CGGATTAGTT
ATTTGGAATA CAATTAGTTC CTCAATTTCT AATTCTCCAC ATCTTTTTGC ACATAATTCT
TCTAACATAA AGAATATGAA CATTAAACCT ATTTTTTATA CTTTAGAAGA GTGGTCTTTT
CAATTGCAAA CATTTATTCA GTCTTTTATA TTAGTATTTT TTGTATTTCT TTTCTTTCAA
TCTGAATTGA TTGGTCATTT ATTATTATAT TCATGGATAC CTCTTTTAAA TTTATTTATT
TTCATATACT GGTTTCCACT AATTGTTTGT ATTATAAGTG TTCGCTTTAC CGATATTGCT
CAATTAGTTC CAATAGTTCT TCAGCTGGTT TTTCTAACTT CACCTATATT GTATAGAAAA
GAAAGTTTAG GCTCCTTAGG TTGGATTACT AACTTAAATT TTATATATCA TATTTTAGAT
CCTTTAAGAG CTAGCATAAT TGAGGGAAAT ATAAACTATC AAGATTCAAT GTTACTTTTA
ATCTTTAATT TGATTGGACT TATTATTACA ATTAGATTAC TTGAGATTGA GAGTAAAAGT
TTACCTTTTT TACTTTGA
 
Protein sequence
MTIIVKMLLD NFKLAFKTRR AWWYTASSRS RARFARTTLG SFWLGFSNLL SIGTLGIVYG 
TVFSVADFKS YFIYLGFGLV IWNTISSSIS NSPHLFAHNS SNIKNMNIKP IFYTLEEWSF
QLQTFIQSFI LVFFVFLFFQ SELIGHLLLY SWIPLLNLFI FIYWFPLIVC IISVRFTDIA
QLVPIVLQLV FLTSPILYRK ESLGSLGWIT NLNFIYHILD PLRASIIEGN INYQDSMLLL
IFNLIGLIIT IRLLEIESKS LPFLL