| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_18901 |
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| Symbol | rpiA |
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| ID | 4779199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 1552528 |
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| End bp | 1553238 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640085179 |
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| Product | ribose-5-phosphate isomerase A |
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| Protein accession | YP_001015710 |
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| Protein GI | 124026595 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0120] Ribose 5-phosphate isomerase |
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| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCTCC AAAACCAGAT GAAAAAAGCA GTTGCTCAAG CTGCTGTAGA TCAAATTCAA
AACGGTATGA TTCTAGGCCT TGGCTCTGGT TCTACAGCAG CTTTGATGAT TGAAGCTCTT
GCTATAAAAA TAAAATCAGG AGAAATTAAA GATGTTGTTG GAGTGACTAC ATCTTTTCAG
GGTGAAGTTC TTGCTTCTGA ATTAGGCATA CCACTTAAAT CTCTTTCATC TGTTTCAGAA
ATTGATCTTG CAATTGATGG TGCTGATGAA GTTGATCCCA AATTTCAATT AATCAAAGGA
GGAGGAGCTT GCCATGTGCA GGAAAAACTT GTTGCTGCTT TAGCTAAAAA ATTTATAGTT
GTTGTTGACT CAACTAAACT TGTTGAAAAA TTGAACCTTG ATTTCAAATT ACCTGTAGAG
GTTCTTCCTT CTGCTTGGAA ACAAGTACAA AAAACATTAA TAAATCTTGG AGGAGAAGGG
AATCTAAGGA TGGCTCAGAA AAAGGCCGGA CCTATAGTTA CTGATCAGGG AAACTTGATA
CTGGATTTAA CCTTTAGGAA CGGTATTGAT CAACCTGAAC TATTGGAAAC TCAAATCAAT
AATATTCCAG GTGTCCTTGA AAATGGACTT TTTGTAAACC TGACTGATGA AGTATTGGTT
GGGAAAGTAG AAAGTGATGT TGTGGGTGTT GAATCACTTA AAAAGATTTA G
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| Protein sequence | MDLQNQMKKA VAQAAVDQIQ NGMILGLGSG STAALMIEAL AIKIKSGEIK DVVGVTTSFQ
GEVLASELGI PLKSLSSVSE IDLAIDGADE VDPKFQLIKG GGACHVQEKL VAALAKKFIV
VVDSTKLVEK LNLDFKLPVE VLPSAWKQVQ KTLINLGGEG NLRMAQKKAG PIVTDQGNLI
LDLTFRNGID QPELLETQIN NIPGVLENGL FVNLTDEVLV GKVESDVVGV ESLKKI
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