| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_16621 |
|---|
| Symbol | serS |
|---|
| ID | 4779877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | + |
|---|
| Start bp | 1353713 |
|---|
| End bp | 1354993 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640084945 |
|---|
| Product | seryl-tRNA synthetase |
|---|
| Protein accession | YP_001015484 |
|---|
| Protein GI | 124026368 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0172] Seryl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.897711 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATAGATC AGAGACTTCT AAGAGAAAAT CCTAATTTAA TTTCGGAAGG GCTTAAATCA
AGAGGAATGG ATGTTGACTT AGGACCTCTA CAAAAATTCT GCAAAGATCT TAAAGACCTA
GAAGAAAAGA GAAATTCCCT ACAAGCACAA GGGAATTCAA TCGGGAAAGA GGTTGGACAA
AAAATAAAAC AAGGTCTTCC TCATGATTCT GAGGAGATTT CAAATCTTCG TGTTAAGGGC
AATCAAATCA AAAAACAAGT TGGAATAATT GAAGAGGAAG AGAAATCAAT TTCAAATAAA
TTAAATGAAC AAATCCTTTG CTTACCTAAT CTTCCAGAGA AGAATTCTCT GGAAGGGAAA
AACGAAAAAG ATAATAAGGA ACTAAGAAGA TGGGGAGAAC CTATTTCAGG AAATACTTTA
AAAGAGCATT GGGAAATTGC TAATCAATTG AACCTCTGGG ATAGTGAGAG ATCTTCTGTA
ATAGCAAAAA GTCGATTTGT AACCCTTTTC AAGCACGCTG CAAAACTTGA GAGATCACTT
ATAAATTTCA TGCTTGATTT ACATATTAAA AAAGGATATT TAGAAGTTCT TCCCCCAGCT
CTTGTTAACA CAGCCAGTCT TACTGGTTCT GGACAGTTAC CAAAATTTGC AGAAGAAAGT
TTTCGATGTG CTGATGATGA TTTATGGCTG ACTCCTACTG CTGAAGTTCC AATAACATCT
CTCCATCGTG GAGAGATCAT CCCTAGAGAT TTGTTACCAT TAAAGTACGT TGCTTATAGC
CCTTGTTTCA GAAGAGAAGC GGGAAGTTAC GGAAGGGATA CTAGAGGTCT AATCAGACTT
CATCAATTCA ATAAAGTTGA ACTATATTGG TTTTCTACTC CAGAAACATC TGAAGATGCT
CTAGAACAAA TCACATCTGA TGCAGAGTCT GTGTTGCAAG AACTTGAACT ACCGTATCGA
GTAATTCAAC TTTGCACAGG CGACTTAGGT TTCTCAGCAA AAAAAACTTA TGATTTGGAG
GTTTGGCTTC CAGGTGCTAA CACTTTTAGA GAAATATCTA GTTGCAGTAA TTGTGGAGAT
TTTCAAGCTA GACGTTCATC AATACGAACA AAAGATAACA ATAAAAAAAA CATACTTTTG
CATACATTAA ATGGAAGTGG ATTGGCTATT GGTCGCACTA TGGCTGCCAT TTTGGAAAAT
GGTCAACAAA GCGATGGAAG TATCAATTTG CCAAAAGCCT TAATACCTTA CTTCGGTTCA
AACAAATTAC AGCCAGAATA A
|
|---|
| Protein sequence | MIDQRLLREN PNLISEGLKS RGMDVDLGPL QKFCKDLKDL EEKRNSLQAQ GNSIGKEVGQ
KIKQGLPHDS EEISNLRVKG NQIKKQVGII EEEEKSISNK LNEQILCLPN LPEKNSLEGK
NEKDNKELRR WGEPISGNTL KEHWEIANQL NLWDSERSSV IAKSRFVTLF KHAAKLERSL
INFMLDLHIK KGYLEVLPPA LVNTASLTGS GQLPKFAEES FRCADDDLWL TPTAEVPITS
LHRGEIIPRD LLPLKYVAYS PCFRREAGSY GRDTRGLIRL HQFNKVELYW FSTPETSEDA
LEQITSDAES VLQELELPYR VIQLCTGDLG FSAKKTYDLE VWLPGANTFR EISSCSNCGD
FQARRSSIRT KDNNKKNILL HTLNGSGLAI GRTMAAILEN GQQSDGSINL PKALIPYFGS
NKLQPE
|
|---|
| |