| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_10341 |
|---|
| Symbol | |
|---|
| ID | 4780908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 952977 |
|---|
| End bp | 954704 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640084313 |
|---|
| Product | cell division protein FtsH4 |
|---|
| Protein accession | YP_001014857 |
|---|
| Protein GI | 124025741 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.194795 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000108584 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAA GTTATAGTCA ATTATTAAGG GATATTGAAA GTGGAGAAAT TATTTCAATT
ATTTTAATTC CAAATAGAAG AGAGGTCATT GTTGAATTAA TAAATGGAGA GAAAAAATTA
ATACCTATAT TTTATAATGA TCAGAAAATT CTTCGAATAT CAGAGGAATA TAATGTTCCT
CTTACTGTAA GAGATATTAG ATCAGATCAG AGATTAGCAA ACTTCATAAC AGGTTTTGGC
CTCACTTTGA TTTTTGTTTT CTCTCTTGTA TTTCTAATTA GAAGATCATC CAAGTTATTA
AACAATCTGC AAAGTTTTTC TGGTCGTTCT TCTCAAGTAA ATGAAGATGA TATTAGAAAA
TACACATTCG ATGATGTGGC TGGATTAAAT CAAGAATCAG ACGAATTAAA GGAAATAGTA
ATCTTTTTAA AGAATCCACA GACATTGAAA GACCTGGGAG CTAAAACGCC GAAGGGAGTT
TTATTAGTGG GTCCACCTGG AACCGGTAAG ACATTACTAG CTCGCTCAAT TGCAGGAGAA
GCTGATGTTC CTTTCTTTTC TATTTCTGCA TCGGAATTTG TTGAAATGTT CGTAGGTGTT
GGAGCTGGAC GTGTCCGTGA TTTATTTAAA AGTGCTAAAT CAAAGGCTCC TTGCATAGTC
TTCATAGATG AAATTGACTC TATTGGACGA CAAAGGGGAG CTGGAATAGG AGGAGGCAAC
GATGAGAGAG AGCAAACCCT TAACCAGCTC TTAACCGAGA TGGATGGATT CGAAGCAAAT
AATGGAGTCA TAGTTATTGC AGCTACGAAT AGACCCGATA TTCTTGACCG AGCATTAACT
AGGCCTGGTA GATTTGACCG TCGTATTGAC ATATCCCTTC CTGATCGAGA AGCTAGACAC
AAAATTTTGT CCGTTCACGC AAGGACAAAA CCTTTATGTG ATTCAGTGAA TCTGAAAGAC
TGGGCAACTA AGACGCCTGG CTACTCAGGT GCAGATTTAC AAAACCTAAT GAATGAGGCT
GCAATCTATG CTGCTAGAAA TAATAAGTCA GTCATAAGTA GTATTGAACT AGAAAATGCA
CTTGAAAAAA CACGATTTGG AATACTGTCT AAGCCACTTT CAGATCAGAT AAAAAAAAGA
CAAATTGCTT ATCAGGTTAT TGGTAAAACC CTTGTTGCTT TATTGATTCC GACCCAAGAT
AAATTAGAAA AAATCTCTTT ATTTAAGTCT CTCGGAAATA TTTCTGGAAT GACTTATTTC
ACACCAGATG AGGAGACCAT AGACAGCGGA CTTTTAACAC GTAACTACAT TTATAACAAA
ATTGTTATTT CACTTGGTTC TAGGGCTGCT GAAATGATTA TTTTTGGCTC TAAGGAAGTT
ACACAAGGAT CGCAAAAGGA ACTAGAAAAT GTATATTTTT GGGCAAATCA AATGGTTACT
AAATTTGGAT TCTCAGATCT TGGACCTATT ACTTATGATT CAGAAAAAGA TACAATTTTT
CTTGGAAAAG ATCTTATGAA GAATAAAAAT GAATATTCTC AGAAGACAAG CAGGGAAATT
GATAAGCAAA TTATTTCAAT AGCAAATAAG GCTGTTAATC ATGCAATATT TCTTCTTTCA
GATAAAGTTT CCTTAATGGA TAATCTTGTT GATGAATTAA TAGTTAAGGA AACTCTTGAA
TCTGATTTTA TAATTGATTC ACTTAATTCT TACTTATCTA GCAACTAA
|
|---|
| Protein sequence | MSKSYSQLLR DIESGEIISI ILIPNRREVI VELINGEKKL IPIFYNDQKI LRISEEYNVP
LTVRDIRSDQ RLANFITGFG LTLIFVFSLV FLIRRSSKLL NNLQSFSGRS SQVNEDDIRK
YTFDDVAGLN QESDELKEIV IFLKNPQTLK DLGAKTPKGV LLVGPPGTGK TLLARSIAGE
ADVPFFSISA SEFVEMFVGV GAGRVRDLFK SAKSKAPCIV FIDEIDSIGR QRGAGIGGGN
DEREQTLNQL LTEMDGFEAN NGVIVIAATN RPDILDRALT RPGRFDRRID ISLPDREARH
KILSVHARTK PLCDSVNLKD WATKTPGYSG ADLQNLMNEA AIYAARNNKS VISSIELENA
LEKTRFGILS KPLSDQIKKR QIAYQVIGKT LVALLIPTQD KLEKISLFKS LGNISGMTYF
TPDEETIDSG LLTRNYIYNK IVISLGSRAA EMIIFGSKEV TQGSQKELEN VYFWANQMVT
KFGFSDLGPI TYDSEKDTIF LGKDLMKNKN EYSQKTSREI DKQIISIANK AVNHAIFLLS
DKVSLMDNLV DELIVKETLE SDFIIDSLNS YLSSN
|
|---|
| |