| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_09391 |
|---|
| Symbol | |
|---|
| ID | 4779331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 866803 |
|---|
| End bp | 867711 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640084216 |
|---|
| Product | integral membrane protein, DUF6 |
|---|
| Protein accession | YP_001014762 |
|---|
| Protein GI | 124025646 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0270489 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.150561 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGAGAAA ACCTACTTAC CAATAAATTA AATATAGAAA AAAATTTTAA AGGGATCAGA
TTTTTAATAG GAAGCGGTTT TGCATTTAGC CTTATGACTG TTTGTGTGAA GGGGATTGGG
GGAAGGATCC CTATTTCAGA ACTTGTATTT GCTAGAGCTA CAATAAGTAT AATAATAACA
AGATTTTACT TATATAAAAA TAACATTAAC CCTTGGGGAT ATCAGAAAAG ATTATTAATT
ATAAGGGGTT TACTAGGAAC AGTTGCACTA TTTTGTATTT TCAAAGCTCT TACAATATTA
CCTATTGCAA CAGCAACAGT AATACAATAT ATTTATCCAA CTTTTACAGT GATATGTGCT
TACATAATTT TAAAGGAATT TATATTCAGA AGAATAGTAT ATTCAATTAT TATTGGCTGG
ATAGGAATTG TTTTAGTTAG TCAGCCGGAA TTCACCAGCA ACAGTAATAT TCAAGAGACA
ATATTAGCAA TAATCATTGC AATATTTGGT GCACTGATGA CATCATTGGC ATATATATGT
GTAAGGAAGC TTTCTTCCAA AGAACACCCT CTTGTAATTA TTTACTACTT TCCTTTGGTC
TCTATCCCCT TATCTATTCC TTTTATTATT AATGATTTTG TATTACCTTC GGGTACAGAT
TGGTTCTTGA TAATAGGTAT TGGTATTTTC ACACAGATTG GACAACTCTG CATAACAGAG
GGGTTAAGAC TACTACCAGC TGGCCAAGCA ACTTCACTAA ATTATTCACA AGTTATATTT
GCATGTATAT GGGGAGTATT GATATTTCAA GAAACAATAA CAAGTTCAAT ATACATAGGT
GGATTTTGCG TTCTTATTTC TACTATTATT AGTATGAGTG CATCCAAGAG AACACAATCA
AAAATATGA
|
|---|
| Protein sequence | MRENLLTNKL NIEKNFKGIR FLIGSGFAFS LMTVCVKGIG GRIPISELVF ARATISIIIT
RFYLYKNNIN PWGYQKRLLI IRGLLGTVAL FCIFKALTIL PIATATVIQY IYPTFTVICA
YIILKEFIFR RIVYSIIIGW IGIVLVSQPE FTSNSNIQET ILAIIIAIFG ALMTSLAYIC
VRKLSSKEHP LVIIYYFPLV SIPLSIPFII NDFVLPSGTD WFLIIGIGIF TQIGQLCITE
GLRLLPAGQA TSLNYSQVIF ACIWGVLIFQ ETITSSIYIG GFCVLISTII SMSASKRTQS
KI
|
|---|
| |