Gene NATL1_07741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_07741 
Symbolspt 
ID4780506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp706712 
End bp707950 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content38% 
IMG OID640084049 
Productserine:pyruvate/alanine:glyoxylate aminotransferase 
Protein accessionYP_001014597 
Protein GI124025481 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.280804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.110591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAATCCC TAAAAAAAAC ACCCCGACTT TGCCTATCGC CTTTTAGGCT CGGAAGATAT 
ATAAACCGAT CTGTTTTCTT GGCCACTCAA ATTCTTCCTT CTGTTGATAA TCAACATCGT
AAAGATTTTG GTCCAACTGT TTCTCCTGAA AGGTTATTGC TTGGGCCAGG CCCATCAAAC
GCAGATCCTG CTGTTTTGAA AGCCCTCTCT CAACCTCCTA TTGGTCATTT AGATCCTTTT
TATGTTGACT TGATGAGTGA GGTACAAGAG TTGCTTAGAT ATGCTTGGCA AACTAGCAAT
CGATTAACAC TTCCAATGAG TGGCACAGGA AGTGCCGCAA TGGAGGCAAC ATTAGCAAAT
GTCGTTGAGC CAGAAGATAC GGTATTAATA GCTATCAAAG GATATTTTGG ACACCGACTT
GCGGATATGG CAGGTAGGTA TAAAGCGAAT GTAGAAACAA TTCATAAAGA ATGGGGTAAT
GCATTTTCAC TTCAGGAAAT AGAAGATGCA TTGAAAAAAC ATACCCCAGC TGTTTTAGCA
ATTGTTCATG CGGAAACTTC AACAGGTGTA TGTCAACCTA TGGATGGCAT TGGTGATTTA
TGCAGAAAAT ATAATTGCTT GCTTCTTGTA GACACAGTAA CTTCTTTGGG AGGCGTTCCT
CTTTATTTGG ATGAATGGAA AATTGATCTG GCTTATAGTT GCAGTCAGAA AGGATTAAGT
TGCCCTCCTG GATTAGGTCC TTTTTCAATG AATGAGAGAG CCGAAAATAA AATGTCAAAT
AGAAAAGAAA AAGTACCAAA TTGGTATTTA GATGTCTCTT TGCTTAATAA ATATTGGGGC
AGTGATCGTG TATATCATCA TACGGCTCCC GTAAATATGA ATTTTGGCAT TAGAGAAGCG
CTTAGATTGT TAGCGGAAGA AGGATTAGAA GTCTCATGGG GTAGACATCG TACAAATGCA
AAATCGCTTT GGAATTCGTT GGAAAATATA GGTTTGGAAT TACACGTTAA AGAAGAATTA
CGCTTACCTA CCCTAACAAC AGTGAAAATA CCTGAGGGAG TTGATGGTAA GGCATTTACT
AAGCATTTAC TAAATAATTT TGGAGTTGAA ATAGGAGGTG GATTAGGTGA TCTGGCTGGA
AAAGTATGGA GAATTGGTTT AATGGGATAT AACTCCACCT CTGAAAATGT AGATAAGATA
ATAAATATTT TTGAAACTGA ATTACCTAAG TTTAGATAA
 
Protein sequence
MQSLKKTPRL CLSPFRLGRY INRSVFLATQ ILPSVDNQHR KDFGPTVSPE RLLLGPGPSN 
ADPAVLKALS QPPIGHLDPF YVDLMSEVQE LLRYAWQTSN RLTLPMSGTG SAAMEATLAN
VVEPEDTVLI AIKGYFGHRL ADMAGRYKAN VETIHKEWGN AFSLQEIEDA LKKHTPAVLA
IVHAETSTGV CQPMDGIGDL CRKYNCLLLV DTVTSLGGVP LYLDEWKIDL AYSCSQKGLS
CPPGLGPFSM NERAENKMSN RKEKVPNWYL DVSLLNKYWG SDRVYHHTAP VNMNFGIREA
LRLLAEEGLE VSWGRHRTNA KSLWNSLENI GLELHVKEEL RLPTLTTVKI PEGVDGKAFT
KHLLNNFGVE IGGGLGDLAG KVWRIGLMGY NSTSENVDKI INIFETELPK FR