Gene NATL1_05711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05711 
Symbol 
ID4780109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp516035 
End bp516727 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content38% 
IMG OID640083848 
ProductSignal peptidase I 
Protein accessionYP_001014398 
Protein GI124025282 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.818825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCAAA ATTATTCAGA TTCGACTAAA GAAGCTAAAA ATTGTTGGTG GTATTCTTTT 
TTTGATACGT GGGGACCTAT CTCTCTAACT ATTCTCCTTT ATGTAGGTAT TCGTCATTTT
ATCGCAGAAG CTAGATATAT ACCCTCGGGC TCAATGCTGC CAGGATTGAA AATAAATGAT
CGACTAATTG TTGAAAAACT TTCTTTGCGC AAAAGGAAAC CTTCGCGTGG GGAAATTGTT
GTTTTCAACT CACCATATTC CTTTGATCAG CAATTGATAG CTGATAGGAC TAAACAACTT
CCGTCTAAAT TTCAATGTTC ATTAATAACT TTTCCATTAA TTTCTTGGAT ACCTGCTCTA
TCTGATCGTG CTTGTGATGC TTATATCAAA CGAATAGTAG CGGTTGGAGG AGATCGTCTT
TTGATTAACG GCAAGGGAGA GATTAATTTG AATGGTAGAT CAATCAATGA ACCATATGTT
ATGAACTTCT GCCCAAGTAA ACCTAAATTT AATCTATGTC CTCCGATGAC TTCAACTGTT
CCTAAGGGAC ATGTATTCGT TTTGGGGGAT AACCGTGCTA ATAGTTGGGA TAGTCGCTTT
TGGCCAGGAG GGGGTTTCTT ACCCCATAAA GAAATAATTG GCAAAGCAAG CTGGCGCTTT
TGGCCTATTA ATCGTTTTGG TAAGCTTAAT TAA
 
Protein sequence
MKQNYSDSTK EAKNCWWYSF FDTWGPISLT ILLYVGIRHF IAEARYIPSG SMLPGLKIND 
RLIVEKLSLR KRKPSRGEIV VFNSPYSFDQ QLIADRTKQL PSKFQCSLIT FPLISWIPAL
SDRACDAYIK RIVAVGGDRL LINGKGEINL NGRSINEPYV MNFCPSKPKF NLCPPMTSTV
PKGHVFVLGD NRANSWDSRF WPGGGFLPHK EIIGKASWRF WPINRFGKLN