Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_05711 |
Symbol | |
ID | 4780109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 516035 |
End bp | 516727 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640083848 |
Product | Signal peptidase I |
Protein accession | YP_001014398 |
Protein GI | 124025282 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.818825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCAAA ATTATTCAGA TTCGACTAAA GAAGCTAAAA ATTGTTGGTG GTATTCTTTT TTTGATACGT GGGGACCTAT CTCTCTAACT ATTCTCCTTT ATGTAGGTAT TCGTCATTTT ATCGCAGAAG CTAGATATAT ACCCTCGGGC TCAATGCTGC CAGGATTGAA AATAAATGAT CGACTAATTG TTGAAAAACT TTCTTTGCGC AAAAGGAAAC CTTCGCGTGG GGAAATTGTT GTTTTCAACT CACCATATTC CTTTGATCAG CAATTGATAG CTGATAGGAC TAAACAACTT CCGTCTAAAT TTCAATGTTC ATTAATAACT TTTCCATTAA TTTCTTGGAT ACCTGCTCTA TCTGATCGTG CTTGTGATGC TTATATCAAA CGAATAGTAG CGGTTGGAGG AGATCGTCTT TTGATTAACG GCAAGGGAGA GATTAATTTG AATGGTAGAT CAATCAATGA ACCATATGTT ATGAACTTCT GCCCAAGTAA ACCTAAATTT AATCTATGTC CTCCGATGAC TTCAACTGTT CCTAAGGGAC ATGTATTCGT TTTGGGGGAT AACCGTGCTA ATAGTTGGGA TAGTCGCTTT TGGCCAGGAG GGGGTTTCTT ACCCCATAAA GAAATAATTG GCAAAGCAAG CTGGCGCTTT TGGCCTATTA ATCGTTTTGG TAAGCTTAAT TAA
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Protein sequence | MKQNYSDSTK EAKNCWWYSF FDTWGPISLT ILLYVGIRHF IAEARYIPSG SMLPGLKIND RLIVEKLSLR KRKPSRGEIV VFNSPYSFDQ QLIADRTKQL PSKFQCSLIT FPLISWIPAL SDRACDAYIK RIVAVGGDRL LINGKGEINL NGRSINEPYV MNFCPSKPKF NLCPPMTSTV PKGHVFVLGD NRANSWDSRF WPGGGFLPHK EIIGKASWRF WPINRFGKLN
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