| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_05601 |
|---|
| Symbol | |
|---|
| ID | 4779370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 507692 |
|---|
| End bp | 508129 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640083837 |
|---|
| Product | single-stranded DNA-binding protein |
|---|
| Protein accession | YP_001014387 |
|---|
| Protein GI | 124025271 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0629] Single-stranded DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0125633 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.367261 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATT GCATGCTTGA GGTTTTGGTA AAGAAGGCCC CAACAGTTCG TTTTACCCAA
GACAACAAAA CTCCGCTAGC TGAAATAGAA GTTGAATTTG ACAGCCTCCG TGCTGATGAC
CCTCCCTGCT CAATTAAGGT AGTTGGTTGG GGAAAATTAG CAGAAGAACT TCAAAATACA
GTTCAAGTCA ATTCTAAATT AGTAATTGAA GGTCGCTTAA GAATGAATAC GGTTCCTCGC
CAGGATGGGA CTAAAGAGAA ACAAGCTGAA TTTACTCTTT CTAGAATCCA CCCCTTTTCC
TCTAAAACAG CTCTTTCATC AATACCTTCT CAAACTCAGT CAAATATAAA AAGCGATTCA
GCTAATCCCT TAAATAACGA GGGTGTTAAA TGGGACAGTT CACCATTAGT ACCTGATACA
GATGACATTC CATTCTGA
|
|---|
| Protein sequence | MNHCMLEVLV KKAPTVRFTQ DNKTPLAEIE VEFDSLRADD PPCSIKVVGW GKLAEELQNT
VQVNSKLVIE GRLRMNTVPR QDGTKEKQAE FTLSRIHPFS SKTALSSIPS QTQSNIKSDS
ANPLNNEGVK WDSSPLVPDT DDIPF
|
|---|
| |