Gene NATL1_05271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05271 
Symbol 
ID4780712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp478248 
End bp478631 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content29% 
IMG OID640083802 
Producthypothetical protein 
Protein accessionYP_001014354 
Protein GI124025238 
COG category[S] Function unknown 
COG ID[COG4333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.172397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0522853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATAA TTAATTTTTC TTCGAGATGG AATTATAAAA ATATCTATAT AATTAATCTC 
TTTGGCCTGA TTTCCAAGTC TCCTCTTCAA CTATCAAAAA GCAATGATCC AATAGGAGAA
AATAATGATT TAATTACTTT AAAATCATTA GAATTTTGGC GGGAAAATAA TAATTGTGAT
TTGTGGTTAG GATGGGGTGA TAAAGGTCAA TTAAATGGAC GTGATCTTAA AGTTCTAAAA
TTAATAAAAA ATTTTTCAAA TTTGAAATCC AATGAAAATA ATTATTCCAA ACGTGTTTTA
AGTCTTGGCC TGAGTAAAAA AGGTAACCCT CGTCACCCTC TCTATATGCC TAATAAATCT
TTCTTAAGAA GGTTTGATCT ATAA
 
Protein sequence
MRIINFSSRW NYKNIYIINL FGLISKSPLQ LSKSNDPIGE NNDLITLKSL EFWRENNNCD 
LWLGWGDKGQ LNGRDLKVLK LIKNFSNLKS NENNYSKRVL SLGLSKKGNP RHPLYMPNKS
FLRRFDL