Gene NATL1_05041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05041 
Symbol 
ID4780937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp459653 
End bp460507 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content37% 
IMG OID640083779 
Productputative multidrug efflux ABC transporter 
Protein accessionYP_001014331 
Protein GI124025215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.112221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACTA CTAACCAATC ACTTCAGAAG GAAAAGCAAT CTAGAAATGA TTTGAATGAA 
ATGTCTCAGG AGATTTCTGC TTTAACTTGG AGGCTTTTCA TTCAATTAAT TCGACGACCC
TCAACGTTAT TTGCAGGGAT TCTTCAGCCT TTGATATGGC TTTTACTTTT TGCAGCGTTA
TTCTCTAAAG CTCCTATTGA TTTTTTGCCA GGGAGCAGTA GTTATGGAGA ATTCCTTGGT
GCAGGATTAA TAGTCTTTAC TGCTTTTAGT GGTGCTCTTA ATGCTGGCCT CCCTTTGATG
TTTGATAGAG AATTTGGTTT TCTAAATCGA CTATTAGTTG CACCATTGAG TAGTAGAAGT
TCAATAGTAA TTTCGTCAGT AATCTATATA ACTTCTATTA GCCTTTTGCA GAGTTTTGCA
ATAATGGCAA CTTCTGCTCT TTTGGGCTAT GGATGGCCAA GTCTGGGAGG TTTTCTTCTC
ATAGCAATAA CCTTATTGTT ATTGGTATTT GCAATAACTG GCCTAAGTCT TGGGTTGGCC
TTTGTTTTAC CAGGACATAT AGAGTTAATT GCAATTATCT TCATAGCTAA TCTGCCTGTC
CTTTTTGCTA GCACAGCCCT AGCCCCCATA TCTTTTATGC CTGAATGGCT TGGATGGATA
GCATCAATTA ATCCATTAAC ATTTGCGATT GAACCTATTC GAATGGCTTA CCACAGTTCT
GTCGATCTGA GAGCAATTTT AATTGATGCT CCTTATGGAG AAGTGAATGG ATATTCTTGT
TTAGCAATTC TATTAATTCT TACTGTTGGA TTATTTTTTC TTATCAGACC TCTTTTAAAT
CGCAAACTTG CTTGA
 
Protein sequence
MITTNQSLQK EKQSRNDLNE MSQEISALTW RLFIQLIRRP STLFAGILQP LIWLLLFAAL 
FSKAPIDFLP GSSSYGEFLG AGLIVFTAFS GALNAGLPLM FDREFGFLNR LLVAPLSSRS
SIVISSVIYI TSISLLQSFA IMATSALLGY GWPSLGGFLL IAITLLLLVF AITGLSLGLA
FVLPGHIELI AIIFIANLPV LFASTALAPI SFMPEWLGWI ASINPLTFAI EPIRMAYHSS
VDLRAILIDA PYGEVNGYSC LAILLILTVG LFFLIRPLLN RKLA