| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_05021 |
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| Symbol | cyoE |
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| ID | 4780948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 457511 |
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| End bp | 458506 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640083777 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001014329 |
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| Protein GI | 124025213 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.196285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTAGCT CTACATCAGA ATTAATTACA CAGCCTGTTA ATCGTGAGGA AGTAGTTCCT
TCTAGAAAGC GTATTAAACT GCCAGCCTGG CTAGAAGTCG TCAAACCAAG ATTAATTCCT
CTTTTACTCG CAACAACTGT TGGAGGAATG GCTCTCTCGG AGGAATGGCC TTTACCCTCT
CCAAGATTGG CATGCACTTT AGGAGGAGGA GCCCTTGCTG CTGCGGCTGC AGGAGCTCTT
AATTGCTTAT GGGAACAAGA TCTTGATAAG CGAATGAAAC GAACCAGTAA TAGAGCATTA
CCTTCTGGTC GCCTTTCTCA GTCTTCTGTT TTTATTGGAG CAGTTGCTTG TACACTTGTT
TCTTCAGCCC TTTTAGTAAG TGGAGTTAAC TGTTTAGCAG CGGGACTTAC TCTTTTAGGA
CTTTGTAGTT ACGTACTTCT CTATACAGCG TTCTTAAAAC CTAGAACATC TCAAAATATA
GTTTTTGGAG GTGTCGCTGG AGCAATTCCC CCTCTTGTAG GAGCTTCAGC AGCGGCAGGA
CATATTGGGT TAGGTGGTTG GTGGCTATTC TCTTTGGTTA TGGTGTGGAC CCCAGCACAT
TTTTGGGCTT TGGCCATCTT GTTGAAAGAG GACTATCGAT CTGTTGGCAT TCCTATGCTT
CCTACAGTAA GTGGACCTTT TGTTACAGCT AAGGCTATCT CTGTGTATGG CTATCTAACT
GTATTTTTAA GCTTTTTAGG GTGCTTCGTT TTACCTGAAG GAGGTTTGTT ATACGGAATT
TTGTTGCTAC CTTATAATTC AAGACTTCTT CAATTGGTTT CCAGATTAAG AGATAATCCC
GAAGATTTAG ATCGTGCGAA GGGTTTATTT CGATGGTCTA TTCTTTACAT GTTTGGGGTT
TGTTTTTTGC TGGTTATTAG TAGATTACAA GTGTCAATTG TTTTTAATGA TCAGTTGATA
GCTTTAATTA AAGACTTCTC TATCGGATTT TCGTAA
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| Protein sequence | MVSSTSELIT QPVNREEVVP SRKRIKLPAW LEVVKPRLIP LLLATTVGGM ALSEEWPLPS
PRLACTLGGG ALAAAAAGAL NCLWEQDLDK RMKRTSNRAL PSGRLSQSSV FIGAVACTLV
SSALLVSGVN CLAAGLTLLG LCSYVLLYTA FLKPRTSQNI VFGGVAGAIP PLVGASAAAG
HIGLGGWWLF SLVMVWTPAH FWALAILLKE DYRSVGIPML PTVSGPFVTA KAISVYGYLT
VFLSFLGCFV LPEGGLLYGI LLLPYNSRLL QLVSRLRDNP EDLDRAKGLF RWSILYMFGV
CFLLVISRLQ VSIVFNDQLI ALIKDFSIGF S
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