Gene NATL1_03151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_03151 
SymbolcrtR 
ID4780446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp291853 
End bp292884 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content35% 
IMG OID640083580 
Productbeta-carotene hydroxylase 
Protein accessionYP_001014144 
Protein GI124025028 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGT GCTTATCGAG GTCTGACAAA AATAAGGCAA CGAAAAAACT GAAGTCATTA 
CGCGACTGGC AAAATGAGAT CCAAGAATAT CTTGATCCGC CAAAGCCTTT AAACGTAACT
TTGGGCCTTT TTTTTGGTGG ATATTTTCTT GCAATAGTTA GTGTTTGGCA GTGGTATCAG
GGGAACTGGC CGTTACCAAT TTTAGTGGCA TTAGCTTTTT TGGCTCTACA TATGGAAGGC
ACTGTTATTC ATGACGCCTG CCACAATGCT GCCCATCCAA ATAAATGGAT CAATCAATTT
ATGGGGCATG GGTCAGCAAT ATTACTAGGT TTTAGTTTTC CAGTTTTCAC AAGAGTTCAT
CTAGAGCATC ACAAATACGT TAACGACCCA AAAAACGATC CAGATCACAT AGTTAGCACC
TTTGGCCCTA TTTGGTTAAT TGCTCCAAGA TTTTTCTATC ATGAATATTT TTTCTTTGAG
CGAAAACTTT GGAGAAAGTT CGAACTAATG CAATGGGGAA TAGAAAGAGG AATATTTATT
TGCATAGTCA TTGCCGGAAT TAAATACAAT TTCATGAATG TTATTTATAA TTTATGGTTC
GGACCAGCAT TAATGGTTGG AGTCACTTTA GGAATATTTT TTGATTATCT ACCGCATAGA
CCTTTTCAGT CTAGAAATAG ATGGAAAAAC GCAAGAGTTT ATCCAAGTAA ATTAATGAAC
TTACTAATAA TGGGACAAAA TTATCATTTA GTTCATCATT TATGGCCCTC TATTCCATGG
TTTGAATATA AACCAGCTTA CGAAGCCACA AAACCACTTT TAGATCAAAA AGGTTCGCCT
CAAAGAATGG GAATTTTTGA AACTAAGAAA GATAGTCTAA ATTTTCTCTA TGATGTTTTA
CTTGGAATCA GAAGCCATAA AGAAAGAAGA AGTAAAATGA GACCATTAGC AAGAATATTA
CCGAAAAACA ATTGGAGGAG AAAATATATA AAATTAATTC ATAAAACTAG AATCAGAACC
GAAAGTAAAT GA
 
Protein sequence
MTQCLSRSDK NKATKKLKSL RDWQNEIQEY LDPPKPLNVT LGLFFGGYFL AIVSVWQWYQ 
GNWPLPILVA LAFLALHMEG TVIHDACHNA AHPNKWINQF MGHGSAILLG FSFPVFTRVH
LEHHKYVNDP KNDPDHIVST FGPIWLIAPR FFYHEYFFFE RKLWRKFELM QWGIERGIFI
CIVIAGIKYN FMNVIYNLWF GPALMVGVTL GIFFDYLPHR PFQSRNRWKN ARVYPSKLMN
LLIMGQNYHL VHHLWPSIPW FEYKPAYEAT KPLLDQKGSP QRMGIFETKK DSLNFLYDVL
LGIRSHKERR SKMRPLARIL PKNNWRRKYI KLIHKTRIRT ESK