| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_00041 |
|---|
| Symbol | |
|---|
| ID | 4780497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 6051 |
|---|
| End bp | 8534 |
|---|
| Gene Length | 2484 bp |
|---|
| Protein Length | 827 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640083267 |
|---|
| Product | DNA gyrase/topoisomerase IV, subunit A |
|---|
| Protein accession | YP_001013833 |
|---|
| Protein GI | 124024717 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.885734 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGG AACGCCTGAA ACCTATATCG TTGCATCAGG AAATGCAGCG TTCTTATCTC
GAGTACGCAA TGAGCGTAAT CGTTGGGAGA GCATTGCCAG ACGCGAGAGA TGGATTGAAG
CCGGTGCAAA GAAGAATTCT TTTTGCAATG CACGAGTTAG GACTTACGCC CGAAAGGCCT
TACAGAAAAT GTGCTCGTGT CGTAGGAGAT GTTCTTGGCA AATATCATCC ACATGGAGAT
CAAGCTGTCT ACGACGCACT TGTAAGACAA GTTCAAATAT TTAATTCAAG ATACCCAATT
CTTGATGGTC ACGGAAACTT TGGATCTATT GATGATGATC CTCCTGCTGC AATGAGATAC
ACAGAGACTA GGCTGGCGCC AATATCTAAC GATGCAATTT TAAGTGAAAT AGATAAAGAA
ACTGTTGATT TTTCACCAAA TTTTGATGGA TCACAACAAG AACCAGACGT TTTACCAGCT
CAATTACCTT TCCTCATCTT AAATGGAAGT ACAGGAATTG CCGTTGGAAT GGCAACAAGC
ATTCCTCCAC ACAATTTGAA CGAAGTGGTA GAGGCCTTAA TAGCAATAAT AAAAAAACCT
TCACTAAACG AAGAAAAATT ATTAGAAATA ATACCTGGAC CAGACTTTCC AACAGGAGGA
GAGATATTAG TTAGTAACGG AATAAAAGAA ACTTACACAA AAGGGAGAGG AAGCATAACC
ATGAGAGGAA TAGCTCGCAT TGAAGAAATT AATCCTGGAA AAGGTAAACA CAAAAGAAGT
GGGATTATTA TTTCAGAACT ACCTTATCAA TTAAACAAAG CTGGCTGGAT TGAAAAATTA
GCTGACCTTG TAAATAATGG AAAAATTTCG GGGATAGCTG ATATTAGAGA TGAAAGCGAT
CGAGACGGAA TGCGAATTCT TGTTGAAGTT AAAAGAGATT CTGATCCAAA AAAAATTCTG
GATTTTTTAT ATCAAAAAAC TTCTTTACAA AGCAATTTTG GTGCAATTTT ACTTGCATTA
GTTAATGGCC AGCCAGTACA ACTTACGTTA AGAAAATTAT TAAATAATTT CTTAGAGTTT
AGAGAAAATA CTATTTTACT AAGAAGTAAT TATTTACTAA AAAATATAAA AAATAGAGAA
GAGATAGTTG AGGCTCTAAT CCAAGCAACA AATAATGTTA GAAAAGTAAT TGAATTAATT
GAAAATTCTA AAGATACACC TGAAGCAAAA AGTAATTTAA TTATCAGCTT AAAGATTAAT
GAAAGGCAAG CAGATGGGAT TCTAGGTATG CCTTTAAAGA AAATTACAGG TCTTGAAAAA
GATTCTCTCA AGAATGAACT TAAAGATTTA AAAACTAAAA GAGCAGAACT CGAATTAATA
ATTAACGACA AAGAAAATTT AATGAAAGTT ATGGTTAAAG AACTCAAAGA TCTTAAAAAA
AGATTTGGTA GTAAAAGAAG AACAAAATTA ATAGAAGGTG GAGATGCTCT TATTGCTGAA
AAGATGGCAA ATCAAAGACC AAATAAAGAA CTTCAAAGAA TAAATGCATT AAAAGAATTA
TCAAAAGATT CTGAAATAAT TATTCAATCA AATAATGAAA TAAAGATAAT TCCCTCACTA
ACAATAAAAA AATTAAAACT GAAAGAAAGT GATCAAGAAA GAAAAGATAT TCTACCTGCA
AAGCTAATAT GGCCAATTAA AAATGAACCA AAGATATTAG CCGTCAGTCA AGAAGGTAAG
ATAGGTCTTC TTAAGTGGGA ATTTGCGGGA CAAAAACCTG GGCCTTTAAA ACAATTTTTA
CCAGCAGGTT TAGAGAATGA TAAAATAATT AATCTTATTC CACTAACAGA AATAAGAGAT
ATAAGTATAG GATTAATAAG TACTGATGGA AAGTTTAAAA GAATTTCAAT TAATGAGATT
AGCGATATTT CTAATAGATC AACAACGATT TTAAAATTAA AAGACAGTAT AAAGCTTAAA
TCTTGCATTC TTTGTAAAGA GAATAGCTAT TTGTATATAG TGAGTGATAT TGGCAGAATT
ATTAAAATTA AAATAACAGA AAATGATTTC CCTTTTATGG GCAAGTTAGC TCAAGGAACA
AATATAATAA AATTATTCCC TAATGAAAAT ATAGTGGAAG CTTTAAGTTT TCAAGAAAAG
AAAAATAAAG ATTTAATTTT AATAACTAAC AAAGGTTCTT TTGTAAAACA TTCTACAAAA
GAAATAACTA TATCCAAAAA AGGAGCATTA GGAATAATGG GAATACATTT TAAAGATAAT
AAAACAATTA AAGAAAGAGT AATTGATTGT TTTATAAATA ATAAACACGT TTTTATTAAA
ACTGATAAGG ATAGATATCA AAGATTAAAA ACCGATCAAA TTGATAATAG TTCATATAGA
AAAGAGAACA AATTAAATAT AGAATTAAAC AATGATGAGT TTTTAAAATC TACTTTTTCA
ATGAAAGTAC CAGACAAAAA TTAA
|
|---|
| Protein sequence | MAKERLKPIS LHQEMQRSYL EYAMSVIVGR ALPDARDGLK PVQRRILFAM HELGLTPERP
YRKCARVVGD VLGKYHPHGD QAVYDALVRQ VQIFNSRYPI LDGHGNFGSI DDDPPAAMRY
TETRLAPISN DAILSEIDKE TVDFSPNFDG SQQEPDVLPA QLPFLILNGS TGIAVGMATS
IPPHNLNEVV EALIAIIKKP SLNEEKLLEI IPGPDFPTGG EILVSNGIKE TYTKGRGSIT
MRGIARIEEI NPGKGKHKRS GIIISELPYQ LNKAGWIEKL ADLVNNGKIS GIADIRDESD
RDGMRILVEV KRDSDPKKIL DFLYQKTSLQ SNFGAILLAL VNGQPVQLTL RKLLNNFLEF
RENTILLRSN YLLKNIKNRE EIVEALIQAT NNVRKVIELI ENSKDTPEAK SNLIISLKIN
ERQADGILGM PLKKITGLEK DSLKNELKDL KTKRAELELI INDKENLMKV MVKELKDLKK
RFGSKRRTKL IEGGDALIAE KMANQRPNKE LQRINALKEL SKDSEIIIQS NNEIKIIPSL
TIKKLKLKES DQERKDILPA KLIWPIKNEP KILAVSQEGK IGLLKWEFAG QKPGPLKQFL
PAGLENDKII NLIPLTEIRD ISIGLISTDG KFKRISINEI SDISNRSTTI LKLKDSIKLK
SCILCKENSY LYIVSDIGRI IKIKITENDF PFMGKLAQGT NIIKLFPNEN IVEALSFQEK
KNKDLILITN KGSFVKHSTK EITISKKGAL GIMGIHFKDN KTIKERVIDC FINNKHVFIK
TDKDRYQRLK TDQIDNSSYR KENKLNIELN NDEFLKSTFS MKVPDKN
|
|---|
| |