| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_17341 |
|---|
| Symbol | rpsC |
|---|
| ID | 4719816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | - |
|---|
| Start bp | 1525264 |
|---|
| End bp | 1525998 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640081428 |
|---|
| Product | 30S ribosomal protein S3 |
|---|
| Protein accession | YP_001012048 |
|---|
| Protein GI | 123966967 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0092] Ribosomal protein S3 |
|---|
| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.361315 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAATA AAATTAATCC AACAGGACTT AGGTTAGGTA TTACCCAAGA ACATCGTTCC
AAATGGTTCG CTACTTCTAA AACTTATCCA ATTCTTCTTC AAGAAGACTA TAAAATCCGT
AACTTTATCC AAAAGAAATA TAGTTCAGCT GGAATTAGTG ATGTTTTAAT TGCTAGAAAA
GCCGATCAGT TAGAACTTGA ATTGAAAACA GCCAGACCTG GAGTAATTGT AGGAAGACAA
GGAAGTGGTA TTGAAGAATT GAGATCAGGC ATTCAAAAAA CTATTGGAGA TAGAACCAGA
CAAGTCAGAA TTAATGTAGT TGAAGTAGAG CGAGTTGATG CTGATGCATA TTTATTAGCT
GAATATATAG CTCAACAATT AGAAAAAAGG GTTGCCTTTC GAAGAACTAT AAGGATGGCT
TTGCAAAGAG CTCAAAGGGC TGGAGTATTA GGTCTGAAGA TACAAGTCGG AGGAAGACTG
AATGGTGCCG AAATAGCTAG ATCAGAATGG ACAAGAGAAG GTAGAGTTCC TCTACATACT
CTGAGAGCTG AAGTTGATTA TGCACTGCGA GAAGCAAATA CAACTTATGG TGTTTTGGGT
ATTAAAGTTT GGGTTTTTAA AGGAGAGGTA CTTCCTAAAG AAGAACAAAC TATTCCTGTT
GGGGCGATAC CTAGAAGGAA AGGTAGTCGA AAGCCACAGC AATTTGAGGA TCGTTCATCT
AATGAGAATT CATAG
|
|---|
| Protein sequence | MGNKINPTGL RLGITQEHRS KWFATSKTYP ILLQEDYKIR NFIQKKYSSA GISDVLIARK
ADQLELELKT ARPGVIVGRQ GSGIEELRSG IQKTIGDRTR QVRINVVEVE RVDADAYLLA
EYIAQQLEKR VAFRRTIRMA LQRAQRAGVL GLKIQVGGRL NGAEIARSEW TREGRVPLHT
LRAEVDYALR EANTTYGVLG IKVWVFKGEV LPKEEQTIPV GAIPRRKGSR KPQQFEDRSS
NENS
|
|---|
| |