| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_17151 |
|---|
| Symbol | truA |
|---|
| ID | 4719797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | - |
|---|
| Start bp | 1515389 |
|---|
| End bp | 1516195 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640081409 |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_001012029 |
|---|
| Protein GI | 123966948 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0101] Pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.137278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAGAG TAGCATTGCT AGTCCAATAT GATGGGTCTT ATTTTTCTGG TTGGCAAAGA
CAGAAAAATG CAATAAGTGT TCAAGAAATG ATAGAAGATG CACTTTTCAA AGTGTCTAAT
CAAATGATTA AAACATTCGC TGCAGGTAGA ACGGATTCTG GGGTTCATGC ATCTGGCCAA
GTAGTCCATT TTGATATTGA TTTTGTAATA CCAAGCGATC GATATGCAAA TGTATTAAAT
AGTAGATTGC CTTCGACAAT TAGAATCTTA GAATCAGTAG AGGTTAAAAA GAATTGGCAT
GCCTGTTATT CTGCGGTTTA TAGACATTAT CGATATGTTA TTAATAATAG TAAGATTCCA
AATTTATTTT TAAATAAATG GTCATGGCAC AGATACCAAA AATCTCTAGA TGAGTTTTTA
ATGTCAAAAG CTTTAAATGG AATGATTGGA GAGCACGATT TTTATGCATT TCAAAAGAGT
GGTAGTACTA GATCAACGTC TGTAACAACA ATAAAATCAA TAGAAATTGA GAGGACGGAG
GATTTGATAT TAATAGATAT AAAGGCTACT GGTTTTCTTT ATGGGATGGT CCGTTCAATA
GTTGGTCAAC TTGTTTTAGT AGGAGAAAAG AAGATATCAC CAGAAATTTT TAAAGATAGA
TGGGTTGGTA AAAAGAAACA GGATGTTCAT GAATCAGCCC CAGCGAACGG CTTATGTTTT
GTTAATTCGG TATATCAAGA AACTATTTTT AAAAGGATTG ATAAAAATGA TCTTTTCCCG
AAATTTGTAA TAAGAGGGTA TTCCTAA
|
|---|
| Protein sequence | MKRVALLVQY DGSYFSGWQR QKNAISVQEM IEDALFKVSN QMIKTFAAGR TDSGVHASGQ
VVHFDIDFVI PSDRYANVLN SRLPSTIRIL ESVEVKKNWH ACYSAVYRHY RYVINNSKIP
NLFLNKWSWH RYQKSLDEFL MSKALNGMIG EHDFYAFQKS GSTRSTSVTT IKSIEIERTE
DLILIDIKAT GFLYGMVRSI VGQLVLVGEK KISPEIFKDR WVGKKKQDVH ESAPANGLCF
VNSVYQETIF KRIDKNDLFP KFVIRGYS
|
|---|
| |