Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_16461 |
Symbol | fumC |
ID | 4720520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | + |
Start bp | 1436452 |
End bp | 1437837 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640081338 |
Product | fumarate hydratase |
Protein accession | YP_001011960 |
Protein GI | 123966879 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAAA ACTTTAGATT TGAAAAAGAT AGTATGGGAA AAATTAAAGT TCCCGCTGAG GCTCTTTGGG GAGCTCAAAC GCAAAGATCA ATTATAAATT TTTCTATTGG CGAGGAATTA ATCCCATTAG AACTGATCTA TTCAATTACA TTAATTAAAA AAGCAGCAGC AATTGCTAAT TTTAAATTGG GTCTAATTAA TGATGTAAAA AAAGATCTAA TTATTGAAGC TTGCACTGAA ATACTTGATG GATATCATGA TTCTCAGTTC CCTTTAAAAA TATGGCAAAC AGGTAGTGGT ACTCAAACAA ATATGAATAT AAATGAAGTC ATATCTAATA TTGCTGCATT AAAAACAAAT TCAGAACTTG GAACTCATAA TCCTATTCAT CCAAATGACG ATGTTAATAA ATCTCAATCT ACAAATGATA CTTTTCCTGC TGCTATTCAG ATATCAGTGG TTACTGAAAT AATTAAAAAA TTAGTTCCTT CAATAAAGGA ACTTACTAAG GTTCTTGATA AAAAAAGTAA TGAGTGGAAA AATCTTATAA AAATAGGAAG AACCCATTTT CAAGATGCCG TTCCAATTTC ACTTGGGCAA GAAGTTTCTG CATGGTCAAA ACAACTAAAA GATGCTGAAG ATACTCTCTT AGTAAGTCTT GATGAATTAT GTTTTTTGCC ACTAGGTGGT ACTGCAGTTG GTACAGGAAT TAATTGTCCA AAAGATTTTC CAGAAGAATC TATAAAATCA ATTTCAGATG ACACTAATGT AGTGTTTTAT AAATCAAATA ATCATTTCTC TTTAATGGCA TCTCATGATC GATTAGCAAA CGTAATGGGT CAAATAAAAA TACTTGCGAG TGCATTATTT AAGATTTCTA ATGATATAAA AATATTATCC TCAGGCCCTA GATCAGGTAT TTATGAGTTA ATAATTCCTC AGAATGAACC TGGCAGCTCA ATCATGCCTG GGAAAGTAAA TCCTACCCAA TGTGAAGCAT TATCCATGGT ATGTACTCAA GTAATGGGTT TTGAATATGC AGTATCAATA GCCAATGCCA GCGGTACTTT ACAAATGAAC GAATATAAGC CACTAATTGG ATTTAATATT CTGAGGAGTA TAAAATTACT GAATAATGCA ATAAGTAACT TTAGATTAAA GTTAATTGAA GGTATACAAC CTAATCCTGA GACTATAAAA GCGAATCTTG AAAATTCACT AATGCTTGTA ACAGCATTAG TACCCAAAAT AGGTTACGAA AAAGCAGCAG AAATTGCGAA TCTTGCTTTT AATGAATCAA TTAACTTAAA AGAGGCAACA CTAAAATTAG GCTATTTAAG TGCCAATGAT TTTGAGGATG CTATAAATAC TGATCAAATG ATCTGA
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Protein sequence | MTKNFRFEKD SMGKIKVPAE ALWGAQTQRS IINFSIGEEL IPLELIYSIT LIKKAAAIAN FKLGLINDVK KDLIIEACTE ILDGYHDSQF PLKIWQTGSG TQTNMNINEV ISNIAALKTN SELGTHNPIH PNDDVNKSQS TNDTFPAAIQ ISVVTEIIKK LVPSIKELTK VLDKKSNEWK NLIKIGRTHF QDAVPISLGQ EVSAWSKQLK DAEDTLLVSL DELCFLPLGG TAVGTGINCP KDFPEESIKS ISDDTNVVFY KSNNHFSLMA SHDRLANVMG QIKILASALF KISNDIKILS SGPRSGIYEL IIPQNEPGSS IMPGKVNPTQ CEALSMVCTQ VMGFEYAVSI ANASGTLQMN EYKPLIGFNI LRSIKLLNNA ISNFRLKLIE GIQPNPETIK ANLENSLMLV TALVPKIGYE KAAEIANLAF NESINLKEAT LKLGYLSAND FEDAINTDQM I
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