Gene P9515_14831 details

Gene Information

• Locus tag: P9515_14831
• Symbol: glgX
• ID: 4720046
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: +
• Start bp: 1317851
• End bp: 1319857
• Gene Length: 2007 bp
• Protein Length: 668 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 640081173
• Product: putative isoamylase
• Protein accession: YP_001011797
• Protein GI: 123966716
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases
• TIGRFAM ID: [TIGR02100] glycogen debranching enzyme GlgX

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.451746
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCCTCTAG GAAGTTCAAT AACATCAAAA GGAGTCAATT TCTCTTTAAT AGCTACAAAC 
GCAGAATATA TAGAAATTTT AGTATTTGAG AAAGAAGATT CAGTTGCTCC AAAAGCAATC 
TTCAAATTAG ATCAAAATCA TAAGACTGGG CCTTACTGGC ATGCGGAAAT AAACGATCTC 
AAGGAAGGAT CTATCTACGC CTTCAGAATA AAGCAGAAGG TAAACGAGCC TAATAAAGAT 
TATTCTAAAA CAGTTTTAAT TGATCCTTGT TCAAGAGGCA TTACAGGATG GAGTAAATAC 
TCTAGAAAAA ATGCGCTAAA TAATTTTGAT AACATGGATT CATGTCTCAA AAGTGTTGTT 
TGTGATAGGA AAGTTTTTAA TTTTAAAAAT TTCCCTAGAC CAAAACACTC TTGGGAAGAA 
ACAATAATTT ATGAGCTCCA TATCAAAGCA TTTACTCAAT CCTCTAATGA AGATGAAAGT 
TGCTTTAAAA AATTTTTAAA AAAAATTCCA TATCTAAAAG AACTTGGCAT AACAAGTATT 
GAATTACTTC CAGTATTTTG TTTTGACCCA AATGATGCTC CTAATGGATT AGAAAATTTT 
TGGGGTTATA GTCCTATTAA CTGGTTTACT CCTCATTTTC AATATCTTTC AAATAAATCT 
GCCGAACAAA ATAGAGAAGA ATTTAGAAAA TTTGTGGAAG AATGCCATAA AGAAAATATT 
GAGGTTATTT TAGATGTGGT ATACAACCAT ACCTCTGAAG GCGATTCCGG GGGGCCAGCA 
ATATCTTGGA AAGGAATAGA TGAAAATCTT TACTATTTCA TCGATAAAGA TAAAAATTAT 
CAGGATGTTA CTGGTTGTGG CAATACAATT GCAGCAAATA GAGGGTTAGT TAGAAAATTA 
ATAATAGAGT CATTAAAGTG CTGGGCAAAT GAATTTGGCG TTGATGGTTT TAGATTTGAT 
TTAGGAATTG CCTTATCTAG AGGAGAAGAT CTTGTCCCAC TTGATAATCC ACCAATTTTT 
GAAGATATTG AATGTGAGCC TGAACTTGCC GATATAAAAC TAATTAGTGA GCCTTGGGAT 
TGTGGAGGAT TATACAAATT AAATAATTTC CCTTCAAAGA AAACGTTTAC ATGGAACGGT 
CATTTCAGAG ATGATTTAAG AAGATTTTGG AGAGGGGATA AAGATTCGGC TTGGAATATG 
AGTGACAAAA TCAAAGGCAG TCCATCACAT TACAAAGAGA ATATTTCTTT CCCAAAGTCT 
ATTAATTTCA TAACTTCTCA CGATGGATTT ACACTAAAAG ATTTAGTTTC TTTTAATAAA 
AAGCATAATT TTGCAAATAA AGAACAAAAT AGAGATGGAG ATAACCACAA CAATTCATGG 
AATCATGGAG TGGAAGGACC TACATCAAAC TTATTTATTA AAAAATTAAG AAAGCGGCAA 
CAAAAAAATT TCCTTTTAAG TTTATTAATC TCAAAAGGAG TCCCTATGAT ACTAATGGGT 
GATGAAATCG GAAGATCTCA GGGCGGTAAT AACAATTCTT GGTGCCAAAA TAATTCCTTG 
GGTTGGATGA ATTGGGATGA AAGCCAACAA GATTTAGAGT TATTAACTTA TCTTAAATAT 
CTAATAAAAA TCAGAAAAAA ATTTATTAAA TTTTTTAATC CTATCTCTCC ACAAAATAGA 
AAAGATATTG ATAATTTAGT TAATTACTAC TGGCATGGTG CAAAGTTAGA AAGCCCAGAT 
TGGAGTAGCT GGTCACATAC AATTGCTTTT AGTATGAATA AAGGTAAAAA TAATCCTTTA 
ATATGGGCAG GCCTAAATGC ATATACAAAA AGTATTGATT TTCACCTGCC AGAATCTAAA 
AGCAAATGGC TTAAAGTTGT TGATACTAAC GAGTCTGGAA CTATCATGCC TATTCCCCTA 
GAACATAAAT CTATTACAGT AGAAAATAGG AGCTCTGTAT TAATTATTTC AGAAGAAGTA 
TTTGGAACAA AAAATATTAT ATTCTAA 

 

Protein sequence

MPLGSSITSK GVNFSLIATN AEYIEILVFE KEDSVAPKAI FKLDQNHKTG PYWHAEINDL 
KEGSIYAFRI KQKVNEPNKD YSKTVLIDPC SRGITGWSKY SRKNALNNFD NMDSCLKSVV 
CDRKVFNFKN FPRPKHSWEE TIIYELHIKA FTQSSNEDES CFKKFLKKIP YLKELGITSI 
ELLPVFCFDP NDAPNGLENF WGYSPINWFT PHFQYLSNKS AEQNREEFRK FVEECHKENI 
EVILDVVYNH TSEGDSGGPA ISWKGIDENL YYFIDKDKNY QDVTGCGNTI AANRGLVRKL 
IIESLKCWAN EFGVDGFRFD LGIALSRGED LVPLDNPPIF EDIECEPELA DIKLISEPWD 
CGGLYKLNNF PSKKTFTWNG HFRDDLRRFW RGDKDSAWNM SDKIKGSPSH YKENISFPKS 
INFITSHDGF TLKDLVSFNK KHNFANKEQN RDGDNHNNSW NHGVEGPTSN LFIKKLRKRQ 
QKNFLLSLLI SKGVPMILMG DEIGRSQGGN NNSWCQNNSL GWMNWDESQQ DLELLTYLKY 
LIKIRKKFIK FFNPISPQNR KDIDNLVNYY WHGAKLESPD WSSWSHTIAF SMNKGKNNPL 
IWAGLNAYTK SIDFHLPESK SKWLKVVDTN ESGTIMPIPL EHKSITVENR SSVLIISEEV 
FGTKNIIF