| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_13271 |
|---|
| Symbol | cobQ |
|---|
| ID | 4718847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | + |
|---|
| Start bp | 1165360 |
|---|
| End bp | 1166892 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640081011 |
|---|
| Product | cobyric acid synthase |
|---|
| Protein accession | YP_001011641 |
|---|
| Protein GI | 123966560 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1492] Cobyric acid synthase |
|---|
| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCA CAGAAAACTA TAATCCGAAA AATAAACCAA TTATGGTTTT AGGAACTTCT
AGTGGAGCTG GTAAATCATT AACAGTCACT GCAATATGCA GGATATTGAA AAAACTTGGT
GAAGAGCCAA TACCTTTTAA AGGACAAAAT ATGAGTAACA ATGCTTGGGT TGATTCTAAT
GGTGGAGAAA TGGCATATTC ACAAGCATTA CAAGCATTTT CTTGCGGGAT TAATCCTTCT
TCCGAAATGA ATCCTATTTT ATTAAAACCA CAGGGTGATT CTACAAGTGA AGTCATTCAT
TTAGGAAAAA GTGTAGGGAT TTCAACAGCA AAAGATTACT ACAAAGATTG GTTTATGCCG
GGATGGGAAG TTATTAAAAA AAGTATAAAT ATCATTTATG AGAAAAACAA AAATTGCCGA
TTAATCATTG AGGGGGCCGG AAGTCCTGTA GAAATGAACT TAATTCATAG GGATCTAACT
AACTTAAGAG TTGCAAAGTA TTTAGACGCG AGTTGTATTT TAGTAACGGA TATTGAAAGA
GGAGGCGTAT TTGCACAAAT AATAGGAACT CTTGAGTTAA TGAAACCTGA AGAAAGAAAG
CTCATAAAAG GGATATTAAT AAATAGATTT AGAGGAGACC TTTCTTTATT TAAAGAAGGT
AAAAAATGGA TAGAAGATAA AACTAAAATT CCTGTTTTAG GAATAATTCC TTGGTTAAAC
GATAAATTCC CTCCAGAAGA TTCTTTAGAT TTGTTAGAAA GAAAATCTTA TTTGAGTAAT
CCTGAAATAA AAGTTGGGAT TATAAAATTA CCATCTATAA GTAATTTTTC AGATTTTGAT
CCATTAGAAA ATGAAAATTC CATATTAATA GAATGGATCA GTGAAGCCCA AAACTTGAAT
CAATTTGATT TTATTATTAT TCCTGGAAGT AAACAGACTA TAAAAGATCA ACTATTTCTT
AATGAGTCTG GATTGTCAAA AGAGATTAAA AACTATTCAC ACAATAATGG CAATATTTTC
GGAATTTGTG GAGGTCTACA AATGTTGGGA ACAGTTCTAG AAGACCCATT TTTTAAAGAA
GGCTCAAATT TTAATTCAGA TCAATCAATT AAGGGGATTG GATTACTACC TTTAAAAACA
ACTTTTCTTA AACATAAAAT AACAAGACAA ATTCACTCTG AATCAATTTG GCCGAACTCA
ACAAAAATCA TTGGATTTGA GATACATAAT GGAATTACTA AATTAGATAG TAGTCATCTT
GATACTTTAA AAACAAATCA TATATTTAAA GATTTCGATC TTGGATGGTA TAAAGAGAAT
AGAGAGGGAG GGACTATTGC GGGAACATAC ATTCATGGGA TTTTTGAAAA TGATGAATGG
AGAGATCACT ATATAAATTT AATTAGAAAG ACTAAAAACA AACTGACATT AGACAAGAAA
TCAAGATCAT ATAAAATGAA ACGAGAATCT ATTATTAACA ATTTAGCGAA CGAATTTAAT
AATCATTTCA ATATTTCATT GCTATTAAAT TGA
|
|---|
| Protein sequence | MEFTENYNPK NKPIMVLGTS SGAGKSLTVT AICRILKKLG EEPIPFKGQN MSNNAWVDSN
GGEMAYSQAL QAFSCGINPS SEMNPILLKP QGDSTSEVIH LGKSVGISTA KDYYKDWFMP
GWEVIKKSIN IIYEKNKNCR LIIEGAGSPV EMNLIHRDLT NLRVAKYLDA SCILVTDIER
GGVFAQIIGT LELMKPEERK LIKGILINRF RGDLSLFKEG KKWIEDKTKI PVLGIIPWLN
DKFPPEDSLD LLERKSYLSN PEIKVGIIKL PSISNFSDFD PLENENSILI EWISEAQNLN
QFDFIIIPGS KQTIKDQLFL NESGLSKEIK NYSHNNGNIF GICGGLQMLG TVLEDPFFKE
GSNFNSDQSI KGIGLLPLKT TFLKHKITRQ IHSESIWPNS TKIIGFEIHN GITKLDSSHL
DTLKTNHIFK DFDLGWYKEN REGGTIAGTY IHGIFENDEW RDHYINLIRK TKNKLTLDKK
SRSYKMKRES IINNLANEFN NHFNISLLLN
|
|---|
| |