| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_11371 |
|---|
| Symbol | |
|---|
| ID | 4719030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | - |
|---|
| Start bp | 989256 |
|---|
| End bp | 990482 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 640080818 |
|---|
| Product | major facilitator superfamily multidrug-efflux transporter |
|---|
| Protein accession | YP_001011451 |
|---|
| Protein GI | 123966370 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTCTCGA ATAAATTTCT AATTAATAAA CTTTGGTGGA ATAAACTTCC TTTTCATTTA
AGGTTAATTA CTAAAATAAG ATTTTTTGCT TCATTTGGAG CAGGAGGAGT TATTTATTTA
ACATCCCTTA TTTTTAATAA TATTGGGTTG TCAGCAACTG AAATTGGCCT AGGTTTTACG
ATATCAGCGA TTATAGGTAC TTTAACAAGA ATCATTACAG GTAATTTCTT AAATAAAACA
TATAAAGTTC ATTATCCCTT TGTTATTTCT TCATTAACAA GTATTGCTGC AGGAATTTTT
CTAATTATTT CAAAAGATGC TTATTTTTAT ATCATTGGGC AAGCTTTTAT TGGTGCAGCT
GCAGGTATAT ATTGGCCAAC AGCTGAGTTT GTAGTCCCAT ATTTTTGTCA AAATATTGAT
ACTAGAAAAG CTTATGCTCT AGTAAGAAGT TCTGAGGCTT TGGGGATATT TCTAGGAGTA
TTTATTGGTG GATTTATGAA TGGTTTTATA TATCTCAAAT CTATTTTTAT TAATGATATT
TTTTGTATGA TCACGATTAT TTTATTGGTT TTAAGAAATA AAGCTTCTAT AAAAATTACT
TTAGAAAAAT CTCAAAAAAA AGCTTTAGAT CTAATTAAAT TAAATCAAGA AAGGTGGAAT
AAAAATACAA TCATAATAGT TTCATCTTTG GTTTTAATTA CTACATCTCT TGCTTTAATT
CAGGTTACAC TTCCTCTTGA TCTAGTTAAG GGCGGTATTT ATAGAGAGGC TATAAATGAA
CAATTAATTA GCTTTATAAT TTCTTTTCAA TTAATTCTAC TATTAATCAT ACAATGGCCA
ATTGGTTCAT GGATATCCAA AAAAGGAAAA TTGTTTGGGT TGAAATTTAG CTTGATCAAC
TTTGCTTTTG CTTCACTTTT ATTATTTATA TCTAGTTATT TAAATATTTC GGCTTTTTAT
TTTATATTTA TTGCAATTAT TCTTGTGGGT TTAGGCACCT CTTCTTTTCT TCCAACATCA
ACCGATGTTG TTTTTAGCAT AGCCCCTTCA AATAAAAAAG GTTATGCACT TGCACTTCTA
TCACAATGTT TTGCTATGGG CTATTTCTTT GGACCTTTAA TTTCTGGAGG GATTTTAGAT
CTTTTTGGTT ATGCCTCTAT AATTTGGGCC GCTATTTCAT TCGTCTGTTT TTTAATGTTC
GCAATAATAT TTAAGAAATT ATTTTAA
|
|---|
| Protein sequence | MVSNKFLINK LWWNKLPFHL RLITKIRFFA SFGAGGVIYL TSLIFNNIGL SATEIGLGFT
ISAIIGTLTR IITGNFLNKT YKVHYPFVIS SLTSIAAGIF LIISKDAYFY IIGQAFIGAA
AGIYWPTAEF VVPYFCQNID TRKAYALVRS SEALGIFLGV FIGGFMNGFI YLKSIFINDI
FCMITIILLV LRNKASIKIT LEKSQKKALD LIKLNQERWN KNTIIIVSSL VLITTSLALI
QVTLPLDLVK GGIYREAINE QLISFIISFQ LILLLIIQWP IGSWISKKGK LFGLKFSLIN
FAFASLLLFI SSYLNISAFY FIFIAIILVG LGTSSFLPTS TDVVFSIAPS NKKGYALALL
SQCFAMGYFF GPLISGGILD LFGYASIIWA AISFVCFLMF AIIFKKLF
|
|---|
| |