Gene P9515_09981 details

Gene Information

• Locus tag: P9515_09981
• Symbol: lspA
• ID: 4719146
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: +
• Start bp: 892222
• End bp: 892680
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 19%
• IMG OID: 640080678
• Product: lipoprotein signal peptidase
• Protein accession: YP_001011312
• Protein GI: 123966231
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAATA TTATATATAA TAGATTTTAT TTTATTTTAT TAAGTACATT AGTTTTTCTG 
TCTGATCAAT ACGCAAAAAT TTTTGTTAGT ACAAATTTTA AATCATTAAT AAATAAAAGC 
TTTTTAATTT TTAGTCTTGA TTATGTAAAA AATTTCGGAG CTGCTTTCAA TCTATTTAGT 
GGTAATAGGA TTTTCTTATC ACTTATAAGC ATAATAATTA CTATACTACT TATATATTTT 
ATTTTAAATA AAAAAAATAT TAGTAATTTA GAATTACTAA GTTTTAGCTT TATATTAGGC 
GGTACATTAG GAAATGGAAT AGATAGAATA AATAAGGGAT ATGTTATAGA CTATATAAAT 
TTAAACTTTA TAAATTTTCC TGTATTTAAT ATTGCAGATA TTTCAATTAA TATTGGCCTC 
ATATTAATTA TATATAGTTT TATTAAATTC AAAAGATAA 

 

Protein sequence

MINIIYNRFY FILLSTLVFL SDQYAKIFVS TNFKSLINKS FLIFSLDYVK NFGAAFNLFS 
GNRIFLSLIS IIITILLIYF ILNKKNISNL ELLSFSFILG GTLGNGIDRI NKGYVIDYIN 
LNFINFPVFN IADISINIGL ILIIYSFIKF KR