| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_03101 |
|---|
| Symbol | |
|---|
| ID | 4718668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | - |
|---|
| Start bp | 285417 |
|---|
| End bp | 286757 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 640079976 |
|---|
| Product | RecB family nuclease |
|---|
| Protein accession | YP_001010626 |
|---|
| Protein GI | 123965545 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2251] Predicted nuclease (RecB family) |
|---|
| TIGRFAM ID | [TIGR03491] RecB family nuclease, putative, TM0106 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCATAAAA TTTGGTCACC ACATCTATCT ATAGAAATAA TTAATAGATA CAAAAACTTT
TATAAAATAA GTAATGGAGA TTTATATACC GGAACAAAAG CATGTAAGAA GGGTTCACGC
GGAGTAATTG GATTAAAAGC GAGATCAAAA TTAACCAACA ACATAAATGC AGAAATCCAA
CCTCAATTAC TTAAAAAAGT AGTTGGACAT AGCAAATGGG GAGATTACAA ATATATTCCT
GTTATGTATA AGTTAGGCCA TAGAACAACA AAAGAGCATC TATTTGATTT AGCCTTTTGT
TCGATTTTAT TAGAACCCTT TCAAGAATCA AAAATTGAGG CGGGATTAGT AATTTCAAAT
TATTCAAATC AAATTAATAT TGAAAGAATT GATTTAAACC AACGATTAAG AAAAAAAGTA
TTAAGTACCT TTTTAAATTT AAACGAAACT CTAAAAAGAT CTATTCCGGA TATTACTGAA
GACAGAAAAA AATGTACGAT ATGTTCATGG CAGAAGTTTT GCGATACCGA AGCAAAAGAT
AATGGATATT TAACTGATAT AGACGGTATC GGTTCTAAAA CTGCTTTCCT TCTCCATAAA
AGTGGGATCT CTAATATTAA AGAACTTGCT ACTGCTCGAG AAATAGATTT AGGAGAAAAA
CTGAATCAAT TCAAAGATCA AAAGTTTGAA AAAGCTTCAA AGTTTATAAA TCAATCAAAA
GCATATTTAT CAGGAACACC AATTCGAATT TTTGAAAGTG ATAACTTATC TTCTCTTTTA
TCAAAAAAAG ATTCAGGATT CTTTATGTTT GATATTGAGT CAAATCCGGA TGAGAAGCAT
GATTTTTTAT ATGGATTTTT AAAAGTAAAT AATTTATTTG AAAATGTTAA AGATGATTTT
TATGATCCAA TATTAAACCT CAAAAAAAAT TGCAAAAAAT CAAATCAAGA AATTATTCAG
AAACTTTTGT CTGAAAAATC CTGGCCAGTT TTACATTATG GAGAAACTGA GAAAATAGCA
ATATTAAAAT TAGCAAGGCA ATTAAATCTT GATGTAAAAG AAATTGAGAT CCTTAAGTCC
CGATTCATAG ACTTGCACTT AATAGTTAGA GGTTCATGGA TATTACCGAT TAGAAACTAT
AGTTTAAAAA CAGTTGCCAA TTGGATGGGA TTCAAATGGA GACAAAAAAA TGTAAGTGGA
TCAAAAGCTT TATATTGGTG GATACAATAC AAAAATACTT TGAATGATCT TTTTTTAAAA
AAGATTATTC AATACAATAG AGATGACTGT ATGGCTACAC TTCAAATCGC AAAGTGGTTA
ATCAAAAAAC GCAATTATTG A
|
|---|
| Protein sequence | MHKIWSPHLS IEIINRYKNF YKISNGDLYT GTKACKKGSR GVIGLKARSK LTNNINAEIQ
PQLLKKVVGH SKWGDYKYIP VMYKLGHRTT KEHLFDLAFC SILLEPFQES KIEAGLVISN
YSNQINIERI DLNQRLRKKV LSTFLNLNET LKRSIPDITE DRKKCTICSW QKFCDTEAKD
NGYLTDIDGI GSKTAFLLHK SGISNIKELA TAREIDLGEK LNQFKDQKFE KASKFINQSK
AYLSGTPIRI FESDNLSSLL SKKDSGFFMF DIESNPDEKH DFLYGFLKVN NLFENVKDDF
YDPILNLKKN CKKSNQEIIQ KLLSEKSWPV LHYGETEKIA ILKLARQLNL DVKEIEILKS
RFIDLHLIVR GSWILPIRNY SLKTVANWMG FKWRQKNVSG SKALYWWIQY KNTLNDLFLK
KIIQYNRDDC MATLQIAKWL IKKRNY
|
|---|
| |