Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_02681 |
Symbol | crtR |
ID | 4720404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 247534 |
End bp | 248433 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640079931 |
Product | Beta-carotene hydroxylase |
Protein accession | YP_001010584 |
Protein GI | 123965503 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3239] Fatty acid desaturase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTTTTTTG GTGGTTATTT TCTTGCTTTT CTAAGTATTT GGCAGTGGTA TAGAGGTGTT TGGCCTCTTC CACTATTAGT TGCTACTGCA TTTCTTGCTC TTCATATTGA AGGCACTGTA ATCCATGATG CATGTCACAA AGCTGCTCAT CCCATACCTT GGATAAATCA AGCAATGGGA CATGGATCAG CTATACTTTT GGGATTCAGT TTTCCAGTTT TTACTAGAGT TCACTTACAA CATCATATTC ATGTAAATGA TCCTAAAAAT GACCCTGATC ATATTGTTAG TACCTTTGGA CCAATTTGGC TTATTGCTCC CAGATTTTTT TATCATGAAA TATTTTTCTT TCAAAGAAAA CTTTGGAGAA AAAATGAATT ACTGCAGTGG GGTTTAGAAA GATCCATATT TATAACAATC ATTTTAGCTG GCTTAAAATT TGACTTTATG AATCTAATTT ATAATTTATG GTTTGGCCCT GCACTTATGG TTGGAGTTAC TTTAGGTATT TTCTTTGATT ATCTCCCACA TCGACCATTC CAATCCAGAA ATAAATGGAT AAACTCAAGA GTTTATCCCG GTAATTTTTT AAATATCCTA ATAATGGGTC AGAATTACCA TTTAATTCAT CACCTATGGC CTTCAATTCC ATGGTTTGAA TATAAAATAG CCTATGAAAA AACCAAACCT TTATTAGAGA TGAAAGGTTC ACCTCAAAGA GTTGGTATTT TTGAAACTAA ACATGATACT TTTAATTTTA TTTATGATCT TCTTATAGGG ATAAGAAGCC ACAAAAGTAA AAAAGGAAAA CTTAGAAAAA TCATAAATTC ATTCCCAATT TTTAAAGTAA AAAAATTTTT ATTAAGGATA GTTAACAAAA ATTTTATTGG CGGTAATTAA
|
Protein sequence | MFFGGYFLAF LSIWQWYRGV WPLPLLVATA FLALHIEGTV IHDACHKAAH PIPWINQAMG HGSAILLGFS FPVFTRVHLQ HHIHVNDPKN DPDHIVSTFG PIWLIAPRFF YHEIFFFQRK LWRKNELLQW GLERSIFITI ILAGLKFDFM NLIYNLWFGP ALMVGVTLGI FFDYLPHRPF QSRNKWINSR VYPGNFLNIL IMGQNYHLIH HLWPSIPWFE YKIAYEKTKP LLEMKGSPQR VGIFETKHDT FNFIYDLLIG IRSHKSKKGK LRKIINSFPI FKVKKFLLRI VNKNFIGGN
|
| |