| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_19221 |
|---|
| Symbol | recN |
|---|
| ID | 4718662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | - |
|---|
| Start bp | 1664431 |
|---|
| End bp | 1666110 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 640079657 |
|---|
| Product | DNA repair protein RecN, ABC transporter |
|---|
| Protein accession | YP_001010311 |
|---|
| Protein GI | 123969454 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0497] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.589308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAATAC AACTAAAAAT AGAAAATATT GCCTTAATAG AAATTATAGA AATTAATTTC
GAAAAAGGTT TGAATATCAT AACTGGGGAT TCTGGTTCAG GAAAATCATT AATTTTGGAT
TCCCTAAATG CTCTCTTTGG TGGAACTAAT ATACCTCTAA AACATTTAAT ACGTCCAGGA
AAAGATTTTT GCGTTATTGA GGCGATATTT TCTTCTTCTT TTCAAATTAA TAATTGGTTA
ATTAGTAATG GTTTTGAAAT AACTTCTTCA GAACTACAAA TTAAAAGAAA ATCTTATAAA
AAAAATAATA AAATCTTATC CAAATATAGC CTTAATGATT TACCAATTAA TAAACAATCA
TTAGAAAAAC TTGGAAGATT TTTAATAGAT TTTGCAGGTC AATCTGACAC TTTTATCTTT
GATTCTTTAG ATAAAAGAAG ACTAATTATT GATGACTTAT GTTCTCAAGA ATTTAGAGAT
ACTAGCGAAA GGATTAAAAG TATATGGAGA GAAAGTGAAA AGCTAACAAG ACTATTGAAT
GAAAAAATAG AATTTTCTAG GAATCAAGAA GAAAAAAACT TGGCAATTAA ACACATGTTG
AAGAGTTTAG AAGAGGCTGA TTTAAATTCA AGTCAAGAAA TTTTAGAACT AGAGTTATTA
GAAAATAAAC TTGTAAATAA TCTTGAAATT AATAATTCAA TTAAATCATC ATTAGAAAAT
TTAAATAATT TTAGTCATGA TGAACCTTCA GTAACTTCTT TTCTAAATCA ATCACTAAAG
ATTTTAAATA AAACAGCCGA TTTCGATTTA AAGATTCAAA AATTCAGAGA GAAGTTATTA
AATATTCATA CTGATGTTGA AGATTTAATT TTTGAGCTGA AGTCATATTT GCAAGAAATA
GAAAATTATG AATCTAATCT TCCAGAAATA CAAAGAAGAT TATTTTTTTT AAAAAACTTA
GAGAGAACTT TTTCATTGGA TTTAACTCAA TTAATTGAAA AACGCGATCA ATTAAAGACC
TATTTTCAAC AAAATGATCA AGGTAATGAG ATTTGCAGTA TTAAATCTCA AATTGAGAAT
TTACAACATA ATTTAAATTC TTTATTTGTT ATTCAATCTA CTGAAAGAAA AAAAATTGCT
AAACAGTTAA AAAATTCAGT AATGTCAACT TTAGGCAATC TAGGTTTAGA AAATGCAAAT
TTTTCAATTC AATTTTCTGC ATCCAAGCCT TCTGGCGATG GAATTGATGA TATAAATTTT
TTGTTTTCGG CTAATCCTGA TCAGAAGCTT GCTCCATTAT CAAATGTTAT TTCTGGCGGA
GAAATGTCAA GATTTTTATT AGCTATTAAA TCTAGTATTT CTAAACAACC TAATACTTTC
TTTTTAGATG AAATTGATAG TGGTTTAAGT GGTAAATCTC TATTTTCTTT GGTTGAGCTT
ATAAAAGAAA TTTCTAAAAA TCAACAAGTC TTATGTATTA CACATCAGCC ATTTCTAGCT
GCTAGGGGAT CAGCTCATTT CAAAGTTCAT AAAAACGTTA TTAATGGAAT AACTTATACT
TCAATTGCAA AACTAACTAC AAAAAATCAA AGAAAAAATG AACTAATAGA ACTTATAGGT
GGAGGTTCAT GCGAAGTAAA CGAATATGCT TCTAGACTAC TTGATTGCTC AGCTGCGTAA
|
|---|
| Protein sequence | MLIQLKIENI ALIEIIEINF EKGLNIITGD SGSGKSLILD SLNALFGGTN IPLKHLIRPG
KDFCVIEAIF SSSFQINNWL ISNGFEITSS ELQIKRKSYK KNNKILSKYS LNDLPINKQS
LEKLGRFLID FAGQSDTFIF DSLDKRRLII DDLCSQEFRD TSERIKSIWR ESEKLTRLLN
EKIEFSRNQE EKNLAIKHML KSLEEADLNS SQEILELELL ENKLVNNLEI NNSIKSSLEN
LNNFSHDEPS VTSFLNQSLK ILNKTADFDL KIQKFREKLL NIHTDVEDLI FELKSYLQEI
ENYESNLPEI QRRLFFLKNL ERTFSLDLTQ LIEKRDQLKT YFQQNDQGNE ICSIKSQIEN
LQHNLNSLFV IQSTERKKIA KQLKNSVMST LGNLGLENAN FSIQFSASKP SGDGIDDINF
LFSANPDQKL APLSNVISGG EMSRFLLAIK SSISKQPNTF FLDEIDSGLS GKSLFSLVEL
IKEISKNQQV LCITHQPFLA ARGSAHFKVH KNVINGITYT SIAKLTTKNQ RKNELIELIG
GGSCEVNEYA SRLLDCSAA
|
|---|
| |