| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_18641 |
|---|
| Symbol | tig |
|---|
| ID | 4718602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | + |
|---|
| Start bp | 1598024 |
|---|
| End bp | 1599448 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640079598 |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_001010254 |
|---|
| Protein GI | 123969396 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0250835 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAG ATGCACTAAT AGTCAAAACA ACTCCTCTGC CTCAAAGTAG AATTTCATTC
GAATTAGAAA TACCATCTGA GACATGCAAA ACGTGTGTAA ATGAAACAAT CAATTCTATC
AGTCGTTCAG CTAAAATTCC GGGATTTAGA CTTGGTAAGA TTCCTAAACA AGTCTTAATC
CAAAGAATTG GCATCACACA ATTACATGCT TCTGCTCTGG AAAAAATTAT TGATAAATCA
TGGCAAGAAG CGTTAAAAAT AAAATCTATA GAGCCACTAA GTGAGCCAGA ATTGGTGGAT
GGATTTGAAT CTTTACTTGC AAAGTTTAGT CCTGAAAAAT CACTTAAGGT TACTCTTCAA
ACTGATGTTG CCCCAGAATT AAAACTTAAA AAATCCAAAG GACTTAGTGT TGAAATATCA
AAGACAAAGT TTGATCCTAA GTCAATAGAT GAAGCGCTAG AAAAATCTAG AAATCAGTTT
GCAAACATTA TTCCAGTTAC CAATAGAGCA GCAAAATTAG GAGATATTGC TGTAGTTAGT
TTCAAAGGAA AATATAAAGA TTCTGGTAAA GAGATTGATG GTGGAACAAG TGAATCAATG
GATCTTGAGT TAGAAAAGAA CAAAATGATT CCCGGTTTCG TTGAGGGAAT CGTAAAGATG
AAAATTGGTG ATACTAAAAC ACTTAACCTT AAATTTCCTG ATGATTATTC TCATGAGGAT
TCAAGAGGCA AAGAAGCAAT TTTTGAAGTA AATCTTAAGG ATCTTAAGGA AAAAGAATTG
CCTGAACTTA ATGACGATTT TGCAAAACAG TCTGGCAACA AAGAATCATT AAAAGAGTTA
AAGAAAGATA TTGAAAAGCA ACTTAAAGAC AATTTTGAAA AAACTCAAAA AGATATCAAA
ATTGAAGCTT TATTAGATGC CTTAACAAAC GAATTGGTTG CTGAAATTCC AAAATCTATG
ATTGATATAG AAGTGAGGAA TAATATTGAA CAAACCGCTC AAAGATTCGC TCAACAAGGT
CTTGATGTTA AATCTACTTT CACTCCAGAA TTAGTTAAGT CATTAGCAGA TTCCACAAGG
CCTCAAGCTG AAAAAAATGT TCAAAGAAAT TTAGCTTTAA AAGCATTAGC TGAAACTGAA
AACATAAAAG TTGAGCAAGA TGAAATTGAT TCAAAAATGA AAGATTATGA AGATGCAATC
TCTCAATCTT CAAAACAAAT AGATATTAAA AAACTAACAG AAGTATTAAC TAACGATTTA
CTCAAAGAAA AATTAATCAT TTGGCTTGAA GAAAATTCTG AAGTAAAAGA AAAAACTACA
AAAACTTCTA AAGCTACAAA AACCTCAAAA ACAACAAAAG CCACAAAAAC TGCGTCAAAA
ACTACAAAAA CTACAAAAAC TCAAAATAAA AAAGAAAAAA AATAA
|
|---|
| Protein sequence | MAKDALIVKT TPLPQSRISF ELEIPSETCK TCVNETINSI SRSAKIPGFR LGKIPKQVLI
QRIGITQLHA SALEKIIDKS WQEALKIKSI EPLSEPELVD GFESLLAKFS PEKSLKVTLQ
TDVAPELKLK KSKGLSVEIS KTKFDPKSID EALEKSRNQF ANIIPVTNRA AKLGDIAVVS
FKGKYKDSGK EIDGGTSESM DLELEKNKMI PGFVEGIVKM KIGDTKTLNL KFPDDYSHED
SRGKEAIFEV NLKDLKEKEL PELNDDFAKQ SGNKESLKEL KKDIEKQLKD NFEKTQKDIK
IEALLDALTN ELVAEIPKSM IDIEVRNNIE QTAQRFAQQG LDVKSTFTPE LVKSLADSTR
PQAEKNVQRN LALKALAETE NIKVEQDEID SKMKDYEDAI SQSSKQIDIK KLTEVLTNDL
LKEKLIIWLE ENSEVKEKTT KTSKATKTSK TTKATKTASK TTKTTKTQNK KEKK
|
|---|
| |