Gene A9601_18251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_18251 
SymbolruvB 
ID4718562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand- 
Start bp1557937 
End bp1558995 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content32% 
IMG OID640079558 
ProductHolliday junction DNA helicase RuvB 
Protein accessionYP_001010215 
Protein GI123969357 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.159071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATAA TTTCTTCCAA TATAGGCGAT AATGACTTTT CTTTTCGAAA AAAAGAACTT 
AGGCTAGTTG ATTCAAAAAA CATTCCAGAA GAAAAGAGAA ATAATAATTT GAACTTAGCC 
CGGCCTCTTA ATTTAAAAGA ATTTATTGGC CAAGAACAAC TTAAATCTTC TTTAAGAGTA 
GCTATAGATG CTTCAATTAT TAGAAAAGAA CCTTTGGAGC ATACTCTTTT ATATGGACAA 
CCTGGTCTAG GTAAGACTAC TCTTGCTTTT TTGATAGCCC ACGAATTGAA TACAAAATGT 
AGGATTGCGA CTGCACCAGC AATTGAAAGA CCAAGAGATA TTGTAGGTTT ACTTCTTGGA 
TTAAAAGAAG GTGAAGTTTT ATTTATCGAT GAGATACATC GCTTAAATAG GTTAACTGAA 
GAGTTGTTAT ATTCTGCAAT GGAGGATTTT AGACTTGACT TAACGATGGG AGCTAATAGA 
GGAGCCCGTT GCAGAACAAT TAATCTTCCT AGGTTTACTC TGATTGGTGC GACAACTAAA 
TTAGCCTCAA TAAGTGCACC TCTAAGAGAT AGATTTGGGA TATCTCAGAA AATTGAATTC 
TATACATGTG ATGAATTAAA ACAAATTATT GTTAATTTCT CCCGATTAAT AAACCTCAAT 
TTAGAAGATG AAGCATCTTA TGATTTGGCA AAGATATCTC GAGGGACTCC AAGAATTGCA 
TTAAGATTAT TAAGACGAGT TAGAGATTAT GCTCAAGTTG TTATGAAAAC TAATACTATC 
TCAGTGAATT TAATAAAAAA AGCTTTAAAT TCTTACCAAA TAGACGAAAA AGGATTGGAT 
TCTTTAGATA GACACTATTT ATCTTTTCTT AACCAAAACA ATAATATTCC AATTGGCCTT 
GATTCAATTG CATCTGGGTT GGGCGATGAT TCTTCAATGT TAGAATTTGT TGTTGAGCCA 
TATCTTATTA AAATTGGTTT TCTTACGAGA ACTCCTCGAG GAAGATTGCT TACTGCTTTA 
GGGAAAAAGT ACATTGATTC AAAAGATGAT AACTTTTAA
 
Protein sequence
MAIISSNIGD NDFSFRKKEL RLVDSKNIPE EKRNNNLNLA RPLNLKEFIG QEQLKSSLRV 
AIDASIIRKE PLEHTLLYGQ PGLGKTTLAF LIAHELNTKC RIATAPAIER PRDIVGLLLG 
LKEGEVLFID EIHRLNRLTE ELLYSAMEDF RLDLTMGANR GARCRTINLP RFTLIGATTK 
LASISAPLRD RFGISQKIEF YTCDELKQII VNFSRLINLN LEDEASYDLA KISRGTPRIA 
LRLLRRVRDY AQVVMKTNTI SVNLIKKALN SYQIDEKGLD SLDRHYLSFL NQNNNIPIGL 
DSIASGLGDD SSMLEFVVEP YLIKIGFLTR TPRGRLLTAL GKKYIDSKDD NF