| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_09321 |
|---|
| Symbol | secF |
|---|
| ID | 4717639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | + |
|---|
| Start bp | 802178 |
|---|
| End bp | 803092 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 640078645 |
|---|
| Product | preprotein translocase subunit SecF |
|---|
| Protein accession | YP_001009323 |
|---|
| Protein GI | 123968465 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0341] Preprotein translocase subunit SecF |
|---|
| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACA ATCTTGAACT AATAAAAAAT AAAAGAAAAA TAATTAGTTT TTCAACTCTT
CTTATTTTGT TAAGTCTTTT AGGAATTTTA TATTCAACTT TTAATACTTC TTATAAGAAA
CCTATAAATT TAGGGATGGA TTTTGTTGGA GGAAATGAAC TAAGAATAGA AAGAGTTTGT
GAAGAAGAAT GTTCTAATCT TTCCCCTGAT TCAGTTTTAG AAAATTTAAG AGAGATCTCT
ATTAATAAAA ACTTTATAAA TAATATTAAA TTACAATTCC AAAATAATAA TAAATTAATT
TCCATAAGAA CGCCTTATTT GAGTATCGAA GAATCAAATA ATCTAATTAC TAATCTTGAA
AATATTATTG GACCTCTAAA TTATGAGAGT AAGGATTCAA GATTAATAGG TCCAAAGCTT
GGGAAAAGAT TACTTACCAA TTGTGTTACT TCTTTGTTGG TTTCTTTATT TGCAATATCT
TTATATATAA CTATTAGGTT TGATAAAAAA TATGCATTAT TTGCATTAAT AGCTTTATTC
CATGATTTAT TAATTGTTTT CGGTATATTT TCCTGGTTGG GAATTATATT ATCTGTCGAG
GTAAATAGTT TATTTGCGGT TTCCTTGTTA ACTATTGCTG GTTATTCTGT AAATGATACT
GTTGTTATTT TTGATAGAAT TCGTGAGAAT TTAAAATCAA AGGAAGAAGG CTATAACGAA
ACTATTCAAT TATCAGTAAA CGAATCATTT AGGAGAACAA CTTTTACCAG TATTACAACC
CTTATCCCTT TATTAAGCAT AATTTTGTTT GGATCTTACT CGCTGTTTTG GTTTTCTTTG
GCCTTATCAG TAGGAATTAT TGTTGGAAGT TATTCAAGCA TTTTATTGGC CCCATCTTTG
TTGCTTAAAG ACTGA
|
|---|
| Protein sequence | MKYNLELIKN KRKIISFSTL LILLSLLGIL YSTFNTSYKK PINLGMDFVG GNELRIERVC
EEECSNLSPD SVLENLREIS INKNFINNIK LQFQNNNKLI SIRTPYLSIE ESNNLITNLE
NIIGPLNYES KDSRLIGPKL GKRLLTNCVT SLLVSLFAIS LYITIRFDKK YALFALIALF
HDLLIVFGIF SWLGIILSVE VNSLFAVSLL TIAGYSVNDT VVIFDRIREN LKSKEEGYNE
TIQLSVNESF RRTTFTSITT LIPLLSIILF GSYSLFWFSL ALSVGIIVGS YSSILLAPSL
LLKD
|
|---|
| |