| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_pTet0012 |
|---|
| Symbol | |
|---|
| ID | 4711606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008790 |
|---|
| Strand | - |
|---|
| Start bp | 11155 |
|---|
| End bp | 12543 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 639856927 |
|---|
| Product | cpp17 |
|---|
| Protein accession | YP_001004016 |
|---|
| Protein GI | 121999263 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000347998 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGTA GTATAAGAAT ATTTGATGAT GAAATAATTG CTAAAAAAGT TTTTACTAAA
ATAGAAAATG CTTCAAAGCT ACCACTAAAT TACATCAATA AAAATAAAGA TAAATACACC
AAAGATATAA AAACAGGTAA GCTTGTTAGT AAAAATATGT TTAGAAAAAA TACAGAAGTC
GTTGTAAAAA TTACTTCAGG TTCTAAAAAT TCTCAAGCAC TTTCAAAACA TCTTGATTAT
ATTTCTCGTG ATGGAAATGT AGAATTAATT ACAAACGATT TTGATATATA TGCTGGAGAA
GATGAGATTT TAGAAGTTAA AAGAATTTTC AAAAATGAAG GATCTCCTAT TCCATTATAT
AAGGAAGGTG CTAAAGAAAA AAGACATACC ATTAATATGG TTTTTTCCAT GAAAGAACAT
TCTACAACAC CAAAAGAAAA ATTACAACAA GCTGTAATTA CTACTTTAAA AAGAATGTAT
CCAAATAATT TTTTTGTAGT TGCTTTTCAT AATGATACTG ATAATCCGCA TTGCCATGTT
TGCTTGAAAG TTGCGGATAA AAATGGCAAA AGAATTAATC CAAAAAAAGC AGATTTAGCA
AATTTAAGAG CAGAATTTGC AAATGCATTA AATGAGTTGG GAATTGAAGC AAAGGCTACA
AATAAAAAGC AAAGAGAAGT AGAAATAAAT CAAGAATTTT CAGTTAAATT AAATACAAAT
AATGAGATTA ATCAAGCACC AAAAATAAAA ATGCATTATT ATCAAGTTAT GGATTTCGGA
GAAGCAAACT ATCAATTTAG CACAGATAAA AATGCCAAAA AAAGTTATTA TGTGAGTTAT
AAAACCAAAA AAGGAATAAC TACAATTTGG GGACAAGATT TAGAAAGGGT TGTGAGAGAA
AATAAAGTTT TAAGGGGTGA ATATGCAAGA TTTAAAATAG TAGGGCAAGA AGAATATGAG
ATAAAAAGAA AGGCAAAAAT TAATAACAAA TGGCAAGAAG TTATTAAAAC ACTTAAAAAA
CCTATTTGGG AAGTATCAGT AATAGGTAGA GAGAAAGATT TAAAACAGAT CAACAAAGCC
AAAACAACAA AAAAATATAA AATTATACAA GATAAAGGAG TGAATAATGA GAGAGATTAT
ACAAAACAAT ATAGACAGAG AGTCTTACAA GAGCTCGGTA ATAAATCAAC TATCCGAAGA
GAAACTGCCC AAGAAAGAAA CTCTATGCGA ATATTGTCCA AACAGCCTAT GGTTCATAAC
ACAAAACGAA CTCAAATGCT TTTGCACATC AATGCACTCA ATCAGTTACA ACAAGGAAAA
CGAGGACGAA CCGATAATAG CTTGCGATGG ACAAGTGCTA GGAATAACGA GATTACAAGA
AATGGATAA
|
|---|
| Protein sequence | MSRSIRIFDD EIIAKKVFTK IENASKLPLN YINKNKDKYT KDIKTGKLVS KNMFRKNTEV
VVKITSGSKN SQALSKHLDY ISRDGNVELI TNDFDIYAGE DEILEVKRIF KNEGSPIPLY
KEGAKEKRHT INMVFSMKEH STTPKEKLQQ AVITTLKRMY PNNFFVVAFH NDTDNPHCHV
CLKVADKNGK RINPKKADLA NLRAEFANAL NELGIEAKAT NKKQREVEIN QEFSVKLNTN
NEINQAPKIK MHYYQVMDFG EANYQFSTDK NAKKSYYVSY KTKKGITTIW GQDLERVVRE
NKVLRGEYAR FKIVGQEEYE IKRKAKINNK WQEVIKTLKK PIWEVSVIGR EKDLKQINKA
KTTKKYKIIQ DKGVNNERDY TKQYRQRVLQ ELGNKSTIRR ETAQERNSMR ILSKQPMVHN
TKRTQMLLHI NALNQLQQGK RGRTDNSLRW TSARNNEITR NG
|
|---|
| |