Gene Hhal_2386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2386 
Symbol 
ID4709714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2623579 
End bp2624412 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content72% 
IMG OID639856861 
Producttype II secretion system protein N 
Protein accessionYP_001003951 
Protein GI121999164 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCCG CCCGCCCGTG GGTCCGGTTG TTGCGACGTC GAAGCCGGGG TGCGCCCCGG 
CTCAGGTGGC CGGGGCGACG ATTCTGGGGG TTCACGGTGC TGGGCCTCGG TGCCTACTGC
GCCTTCCTCC TGGCGCACTG GCCGGCGGCC CACGCCTGGT CGTTGGCCGA GCGCTACCTG
TCCGTGCCGC CCGAGGTGCA AGTGGGCACT CTGGACGGTA CCGTCTGGGA CGGCCAGGGC
ATCCAGGTCG GGACGACAGA CCTGCAGGCG GAGCAGATCC GCTGGCGCGT CCGTCCGGCG
GCGCTGCTCA CCGGTCGGCT GGAGGCAACG ATCGAGGCCT CAATGGGGGA CGGGTTCGCC
GAGGGGCGGG CGACCCTCGC CGCCGGCGGG CTGAGCCTGC GCGATGTCCA CGGCCGCTTC
CCGGCGGCGC CGTGGAGCCG GTTGGCCGCC CAGTTCGGCG AGGAAGTGCT GCTCGCCGGG
ACGTTCGCCT TTGCCATCGA CACCTTACGG GTCGACCGTG GAGGTCGCCT GCAGCAGGTC
GATGGCCGCC TCGCCTGGCA CGACGCCGCC GTCACTGTTG ACGAATACGT TGAGCTCGGC
GGCCTGACCA CTCAGCTGCG GGCCGAGGAC GGCGCGCTGG TTGGTGAGCT CGGCGATACC
GGTGGCCCGC TTCAGTTGGG CGGGGGCTGG CGGCTGGATC CGGCCGGTTC CTATGAGCTG
GATGCCGTCG TGGATACGCG GGACGGCGCC GCGGACATCC TGACCCGCAG CATCGAGATG
GCCGGGCCCC GCCGGGAAGA CGGGGTGCAC GTGGGTATCG AAGGGACCCT TTAG
 
Protein sequence
MTAARPWVRL LRRRSRGAPR LRWPGRRFWG FTVLGLGAYC AFLLAHWPAA HAWSLAERYL 
SVPPEVQVGT LDGTVWDGQG IQVGTTDLQA EQIRWRVRPA ALLTGRLEAT IEASMGDGFA
EGRATLAAGG LSLRDVHGRF PAAPWSRLAA QFGEEVLLAG TFAFAIDTLR VDRGGRLQQV
DGRLAWHDAA VTVDEYVELG GLTTQLRAED GALVGELGDT GGPLQLGGGW RLDPAGSYEL
DAVVDTRDGA ADILTRSIEM AGPRREDGVH VGIEGTL