| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2373 |
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| Symbol | |
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| ID | 4710064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 2607745 |
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| End bp | 2608308 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639856848 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_001003938 |
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| Protein GI | 121999151 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.495108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAGAT CGGCAACTGG GACGTGGACT GACCGACGCC GCGCCGGCTT CACGCTCGTC
GAGCTCCTGG CGGTCATCGC CATCATGGCG GCGCTCACCG GGCTGGTGGT GATCTCGGTG
GGCGACGGCG GGCGGGACCG GGAGGTCCAC CAGCACGCGC AGCGCCTCGC CGCCCTGATC
GAGCTGGCCC GCGAGGAGGT CCTGCTCGGC GCGGGCGAGG TGGGCGTGGC CTTCACCCGG
CACCGCTACC ACTTCCAGCG CCAGCAGCTG GTGGATGACG ACACGGTGGA GTGGCGCGAC
ATCCCCGATG CCGATACCCT CCGGCCCCGC TCGCTACTCG ACGACGACCT GGAGCTGGCC
CTGCGGGTCG CAGGGCGCGG GGCGCCGCTG GAGCTGGATC CGGAGCACCC GGACCCTCAA
GTCTTCATCG AGGGCAGTGG GGAGATCACC CCCTTTGAAC TCTTCCTGAT CGACTCGGAC
GATCGCGAGC GCGCCGTCCG CCTGACCGGC GAGATGGACG GCTCGCTGGC CATCGACCGG
CCCGGCCCAC GGGAGCTGCC ATGA
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| Protein sequence | MPRSATGTWT DRRRAGFTLV ELLAVIAIMA ALTGLVVISV GDGGRDREVH QHAQRLAALI
ELAREEVLLG AGEVGVAFTR HRYHFQRQQL VDDDTVEWRD IPDADTLRPR SLLDDDLELA
LRVAGRGAPL ELDPEHPDPQ VFIEGSGEIT PFELFLIDSD DRERAVRLTG EMDGSLAIDR
PGPRELP
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