| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2294 |
|---|
| Symbol | |
|---|
| ID | 4709113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 2519725 |
|---|
| End bp | 2522763 |
|---|
| Gene Length | 3039 bp |
|---|
| Protein Length | 1012 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639856769 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_001003859 |
|---|
| Protein GI | 121999072 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCATCG GCGGCTGGAG CCTGGCGCGT GCCCGGCTGA TCGTCTTCGC GACGGTCCTG
ATCGGGCTGT CCGGCCTGTG GGCCTACGGC CAGCTCGGGC AGCTCGAGGA CCCCGACTTC
ACGATCCACA CCGCTCTGGT CCAGGCCGAG TACCCCGGTG CCCGGGCCGA GCGGGTGGAG
GCGGAGGTCA CCGAGGTCCT GGAGCGGCAT ATCCAACAGC TGGAAGAGCT CGAGGAGATC
GAGTCGGTCA GCCGCGACGG CGACGTGGTG ATCTACGTCG ACGTCGACGA ACGCTACTCC
GGGGCGCGTC TGCGCCAGAT CTGGGACGAG CTGAACAAGA AGGTCCAGCG CGCCAGCCTC
GAGCTGCCCA ACGAGGTACG CGGGCCGGTG GTGGACGACG ACTACGGCGA CGTCTTCGGG
CTCCTCTACG CCGTCACCGG CGAGGGCTAC AGCCTGCGCA AGATCGACGA TTACGCCGAT
GAGCTCCGCC GCGAGCTGCT GCGCGTCCCC GGTGTGGCCC GCGCGGAGCT CTTCGGGCGC
CAGGGCGAGC GGATCTTCAT CGAGATCAGC CGTGAGCGGC TGTCGGCACT GAACCTCCAC
CCCGGGCAGA TCGCCGAGAC CCTGCAACGG CAGAACGTGG TCGCCCCGGC CGGCGCCATC
GACCTGGACG ACCACCGGGT GGGGCTGTTC GTCTCCGGGA CCTTCGACAG TGTCGAGGAC
GTGCGCGGGC TGTCCATCCG CAACCCGGAG ACCGACGAGC GGATCTACCT GCGCGACATC
GCCGATGTGC GCCGCGGCTT CGCCGATCCA CCGGAGCGGG TCTTCCGCCA CGACGGCGAG
CCGGGTGTGG CCCTCGGGAT CTCACCGGCT CCGGGGACCA ATGTCGTTGA ACTCGGCGAG
CGCATCGAGC AACGCCTGGC CGAACTCGAG CACGACCGCC CAGTGGGCAT GACGTTGCAT
ACCGTCAACG ACCAACCAGA GACGGTGCGC GGGGCCATCG CCGAGTTCGT GACCAACCTG
GCCACTGCCG TGGTCATCGT GCTTGCCGTG CTGTTGATCG CCCTGGGCTG GCGAACCGGT
TTGATTGTCG GCGCAGGCGT GCCCCTGACC ATCCTCGGCA CCTTCCTGGT GATGTGGGTC
ACCGGCATCG ACCTGCACCG CGTCTCACTG GGGGCGCTGA TCGTCGTCCT GGGCATGCTG
GTGGACAACG CCATCGTGGT CGCCGAGCTG ACCATGACCC GAATCCAGCG TGGCGTCGAG
CGGGCGAAGG CGGCCCGACA GGCGGTCAGC GAGACGGCCA TACCGCTGCT GATCGGGACC
GCCATCGCCG CCCTGGCCTT CTCGCCGATC AGCTTCACGC CGTCAGCGGT GGGCGAGTTC
ACCAGCTCCC TGTTCTGGGT GGTCGCCTTC GCCCTGGGCC TGAGCTGGAT CCTGGCGGTG
ACCTTCACCA CCCTGCTCGC CTACCGCTTC CTGCCGGCAC CGACCAGCGG CGAGGCCCGT
GACCCCCACG ACACCCTCTG GCACCGGGCC TACCGGCGCG CCCTGGGCGG GATGCTGCGC
TACCGCACCA CCAGCCTGAT CACCGTCCTG CTGGTGGTGG CCATCGCCGT GGCCGCCTTC
ACCCTGGTGC CACGGATCTT CTTTCCGGCC GCTGATCGCG ATCAGTTCCT GATCGACCAC
TGGCGCAGCG AGGGCACCCG CATCGAGGCA GTGGCCGACG AGACGGCGCG CCTCGAGGCC
TTCCTCCGCG AACACGACGA TGTGGCTCGG GTCACCACCT TTGTCGGTGA GGGGGCGCCG
CGCTTCTACC TGCCAATGAT CCCCGAGCTG CCCAATCCAG CCTACGCCCA GCTGCTGGTC
GGCACGGAAC CGGACAGCGA CCTGGATGCG GTTATGGCCG ACGTGCGCGA CTGGCTGGAT
GGGCGGTTCG CCGACGCGCA GCCACGGGTG CGACCGATGA TGCTCGGGGA CCCGGTACGC
TACCCGGTGG AACTGCGCGT GGCCGGCCCG CGTGACCACG CCGAGCTGCG CCAGGTCGCC
GAGGAACTGC GCGACTGGCT GGCGGGCCAG CCGGAGACCG CAGGCACGCG ACACAATTGG
CGCCAGCAGG CGCTATCTCT GGACGTCGAA GTCGACCAGG AGCGAGCCCG CGCCGCCGGG
CTCTCCTCGG CCGAGGTGGC AGAAACCCTG GAGATGGCCT ACGACGACGG CCCCATCGGG
GTGCTCATCG ATGGCGACCG CCACCTGCCC ATCCACTGGT ACCTGCCGGA GGTCGAGCGC
GGTGACCTTT CGCGACTCGA TACCCTGGAG ATCTGGCCCC GGGACAGCGA GCGCCCGGTA
CCGCTGCGCC AGGTAGCGAA CCTGAAGCCG GCCTGGGAGG AGCGCAGCAT CTGGCGCCAG
GACCGCGTGC CGACGGTGAC CGTGCAGGCC GACCTGGTGC CCGGCGCCAC CGCCGAGGGG
CTGGTGGCCC GACTCGACCC GCAGCTCGAC GAGCTCGACC TGCCCTCCGG GCTGGAGCTG
GCCTGGGGGG GTGAGGCCGA GGCCTCGTGG GAGGCGCGCG CTGACGTGCT GATCTTCGTG
CCCCTGGTGC TGGCGGTGAT GGCCCTGCTC CTGGTGGCCC AGTTCAACAG CCTGCGCGAC
GCCACCGTGG TGGCCCTCAC CGTACCCCTG GGGCTGATCG GGGTGGTTGC CGGGCTCCTG
CTCTTCCGCC AGCCGTTCGG CTTCATCGCC CTGCTCGGCG CCATGAGCCT GGCCGGCATG
CTGATCCGCA ACGCCATCGT CCTGGTCGAG CAGATCCGGC TCAACCGCGC GGACGGCATG
GCCACCCACC CGGCCATCGT CGAGGCCGGC GTCGGCCGCA TGCGCCCGGT GCTGCTGACC
GCGGCCACCA CCATCCTGGG CATGATCCCG CTGGCCCTCT CGGGCCCCTT CTGGGCGCCC
ATGGCCACCG CGGTCATGTC CGGCCTGGCC TTCGGCACTA TCCTCATCCT CGGCGTGGTA
CCCGTCCTCT ACGCCCTCTT GCATCGCGCC GAACGCTAG
|
|---|
| Protein sequence | MSIGGWSLAR ARLIVFATVL IGLSGLWAYG QLGQLEDPDF TIHTALVQAE YPGARAERVE
AEVTEVLERH IQQLEELEEI ESVSRDGDVV IYVDVDERYS GARLRQIWDE LNKKVQRASL
ELPNEVRGPV VDDDYGDVFG LLYAVTGEGY SLRKIDDYAD ELRRELLRVP GVARAELFGR
QGERIFIEIS RERLSALNLH PGQIAETLQR QNVVAPAGAI DLDDHRVGLF VSGTFDSVED
VRGLSIRNPE TDERIYLRDI ADVRRGFADP PERVFRHDGE PGVALGISPA PGTNVVELGE
RIEQRLAELE HDRPVGMTLH TVNDQPETVR GAIAEFVTNL ATAVVIVLAV LLIALGWRTG
LIVGAGVPLT ILGTFLVMWV TGIDLHRVSL GALIVVLGML VDNAIVVAEL TMTRIQRGVE
RAKAARQAVS ETAIPLLIGT AIAALAFSPI SFTPSAVGEF TSSLFWVVAF ALGLSWILAV
TFTTLLAYRF LPAPTSGEAR DPHDTLWHRA YRRALGGMLR YRTTSLITVL LVVAIAVAAF
TLVPRIFFPA ADRDQFLIDH WRSEGTRIEA VADETARLEA FLREHDDVAR VTTFVGEGAP
RFYLPMIPEL PNPAYAQLLV GTEPDSDLDA VMADVRDWLD GRFADAQPRV RPMMLGDPVR
YPVELRVAGP RDHAELRQVA EELRDWLAGQ PETAGTRHNW RQQALSLDVE VDQERARAAG
LSSAEVAETL EMAYDDGPIG VLIDGDRHLP IHWYLPEVER GDLSRLDTLE IWPRDSERPV
PLRQVANLKP AWEERSIWRQ DRVPTVTVQA DLVPGATAEG LVARLDPQLD ELDLPSGLEL
AWGGEAEASW EARADVLIFV PLVLAVMALL LVAQFNSLRD ATVVALTVPL GLIGVVAGLL
LFRQPFGFIA LLGAMSLAGM LIRNAIVLVE QIRLNRADGM ATHPAIVEAG VGRMRPVLLT
AATTILGMIP LALSGPFWAP MATAVMSGLA FGTILILGVV PVLYALLHRA ER
|
|---|
| |