Gene Hhal_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2198 
Symbol 
ID4709552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2412288 
End bp2413190 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content68% 
IMG OID639856673 
Productdihydrodipicolinate synthase 
Protein accessionYP_001003764 
Protein GI121998977 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0796408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAGG TGGTGATGTT CCGCGGCAGC ATGGTGGCGA TGGTCACCCC GATGAAGGCG 
CAGGATGGAA TTCGGGACGC CGTGGATGAG AAGGCGCTCA AGCAGCTGGT CGAGTATCAC
GTCGAGCAGG GCAGTGACGC CATCGTTGCC GTGGGGACCA CCGGCGAATC GGCCACTCTC
GACTACGAAG AGCACCGGGA TGTGATCCGC GCCACGGTCG AGGCCGCTGC GGGCCGAATC
CCGGTGATCG GCGGCACCGG TGCCAACTCG ACCTGGGAGG CCATCGAGCT GACCCGCAGC
GCCATGGAGG CCGGCTGTGA TGCGGCGCTG CTGGTGGTGC CCTACTACAA CAAGCCCACC
CAGGAAGGGC TGGTTCAGCA CTTCAGCGCC ATCGCCGAGG CGGTGCCCAT CCCTCAGATC
CTCTACAACG TGCCGGGCCG CACTGGGTGC GACATGCTCC CCGAGACCGT CGAGCGCCTT
GCCGACCTGC CCAACGTGGT CGGCCTCAAG GAGGCCCAGG GCACCGTGGA GCGGGCCGAG
GAGGTGATCC GCCGCTGCGG TGATCGGCTG GATGTCTTCG CCGGCGACGA CTTCAACGCC
CTGGGCATGA TGCGGGTCGG TGGCAAGGGG GTGATCTCGG TCAGCGCCAA TGTCGTCCCG
CGGCAGATGC ACGACCTCTG TGCGGCCGCC CTGGCCGGCG ACATGCAGAC CGCCGAGGCC
ATCAACGAGC GCCTGACGCC CCTGCACCAG GCGATGTTCT GCGAGCCTAA CCCGGTACCG
GTGAAGTGGG CGGTGGAGGA GCTCGGCATG GCCGGTTCCG GTATGCGCCT GCCCATGACC
CGCCTGACCG AGGCCGGGCA GGCCCGGGTG CGCCAGGCGA TGCAAGACGC CGGTCTGCTG
TGA
 
Protein sequence
MTEVVMFRGS MVAMVTPMKA QDGIRDAVDE KALKQLVEYH VEQGSDAIVA VGTTGESATL 
DYEEHRDVIR ATVEAAAGRI PVIGGTGANS TWEAIELTRS AMEAGCDAAL LVVPYYNKPT
QEGLVQHFSA IAEAVPIPQI LYNVPGRTGC DMLPETVERL ADLPNVVGLK EAQGTVERAE
EVIRRCGDRL DVFAGDDFNA LGMMRVGGKG VISVSANVVP RQMHDLCAAA LAGDMQTAEA
INERLTPLHQ AMFCEPNPVP VKWAVEELGM AGSGMRLPMT RLTEAGQARV RQAMQDAGLL