| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1988 |
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| Symbol | |
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| ID | 4710327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 2191051 |
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| End bp | 2192139 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639856461 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001003554 |
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| Protein GI | 121998767 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCTCCG TAGCAGCCCT CGCCCTGCTC GCCGCTGCCT GCGGCGAAGA CGCCGACAAC
GGCGAGGCCA CCGCCGAGGA GGACGCCATC CCCGTCACCT GGATCGAGGC CGCCGAGGAA
GAGGTCCGCG AGGTCCGCAA CACCGTCGGC AGCATCGAAG CCAAGTCGCG GCCGCTACTC
GCCGCCGAGG TGGGCGGCGT CATCGACACC ATCCACGTCG ACGAGGGGGC GCAGGTCGAC
CGCGGCGAAC TCCTCGCCGA GATCGACCGC GAGGATTACA TCGATGACCG CGACGCGGCC
GCCGGCGACG TGGCCCGCCT GACCGCCATG GTCGGCGTGC AGGAGCGCAA CGTGGCCCGC
AACCGGGAGC TCTACGAGGA CGACCACATC TCCGAGGACG AGCTCGACAA CGCCGAGGCC
GAGCTTGAAG CCCGCGAGGA AGAGCTCGCC TCCGCCCTCG CCCAGCTGCG GCGGGCCGAG
CGGGATCTGG AACGCACCCG GATCCGCGCC GTGGTCAGCG GCGCCGTGGA CGAGCGCCAC
ATCAGCGCGG GCGACTACGT CAACGCCGGC GACGCCGTCT TCCAACTGAT CAACCTGGAC
CGGCTCAAGG TCCGCCTGCC GGTCTCCGAA AGCCTGGCCC CCCGGGTCGA CAGCGGCACG
GAGCTGATCC TCAGCAGCCG CTCTGGCCTC CGCCCGGACC TGAAGACCAC GGTCTCGGAC
CTGCGCCCCG GTATCCGTGA TGCCACCCGC TCGCTGCAGC TTATCGCCGA GGTCGACAAC
CCCGGGGGGT GGCGCCCCGG CGCCAGCGCC GAGGCGGAGG TGGTGCTCGA TGTCCGCGAC
GGCATCGTCG TACCCAACCA GAGCGTCGTG CGCCGCCCCG CCGGCGAGGT GGCCTACGTA
CTGAGCGAAG ACGAGGGCCG GGTCGAGGAG CGCACCGTTG AGGTGGGGAC CCGCTTTGGG
GACCGCGCCG AGATCCGCGA CGGCCTGGAA CCCGGTGAGC GGCTCGTCCT CGACGGTGCG
GGCTTCCTCA CCGACGGCGC CGCCGTGGAC GCCGCTCCCC ACGAAGGCGA CGACACGGAT
ACGGAGTAA
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| Protein sequence | MVSVAALALL AAACGEDADN GEATAEEDAI PVTWIEAAEE EVREVRNTVG SIEAKSRPLL
AAEVGGVIDT IHVDEGAQVD RGELLAEIDR EDYIDDRDAA AGDVARLTAM VGVQERNVAR
NRELYEDDHI SEDELDNAEA ELEAREEELA SALAQLRRAE RDLERTRIRA VVSGAVDERH
ISAGDYVNAG DAVFQLINLD RLKVRLPVSE SLAPRVDSGT ELILSSRSGL RPDLKTTVSD
LRPGIRDATR SLQLIAEVDN PGGWRPGASA EAEVVLDVRD GIVVPNQSVV RRPAGEVAYV
LSEDEGRVEE RTVEVGTRFG DRAEIRDGLE PGERLVLDGA GFLTDGAAVD AAPHEGDDTD
TE
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