Gene Hhal_1972 details

Gene Information

• Locus tag: Hhal_1972
• ID: 4710455
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 2173776
• End bp: 2174327
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 639856445
• Product: hypothetical protein
• Protein accession: YP_001003538
• Protein GI: 121998751
• COG category: [R] General function prediction only
• COG ID: [COG2151] Predicted metal-sulfur cluster biosynthetic enzyme
• TIGRFAM ID: [TIGR03406] probable FeS assembly SUF system protein SufT

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACGCAC CCAAAGGCGA ACCCATCACC TTCCAGCGCG ACTGCGAGGC CGTGGTCATC 
CCTGCCGGGG ACACCGGCGT CATCCCCGCC GGTGCCGAGG GGGTGCTGAC CCAGGCCCTC 
GGCGGCAGCT ACACCATCTA CCTCCAGGGC TATCTGTTCC GCATCGACGG CGCCAATGCC 
GACGCCATCG GCAAGGAACC GCCCCAGCCC CCACAGCTGC CGGAGGGGGC CACCGACGAA 
GACGTGGAGC GCCTGATCTG GGAGCAGATG GCCACCTGCT ACGACCCGGA GATCCCGGTC 
AACGTGGTCG ACCTCGGGTT GATCTATCGC TGCGACATCC GCAAGGACGA GCACGGCCAG 
CGCCACGTCG ATATCGACAT GACCCTCACC GCCCCCGGCT GCGGGATGGG CGATATCCTC 
GCCCACGACG TCCGGGTCAA GGTCCAGATG GTGCCCACGG TCGCCGAGGC GCAGGTCAAC 
CTCGTCTTCA CCCCGCCGTG GAGCAAAGAG ATGATGTCCG AGGCCGCCAA GCTCCAGGTC 
GGCCTGATGT AG 

 

Protein sequence

MYAPKGEPIT FQRDCEAVVI PAGDTGVIPA GAEGVLTQAL GGSYTIYLQG YLFRIDGANA 
DAIGKEPPQP PQLPEGATDE DVERLIWEQM ATCYDPEIPV NVVDLGLIYR CDIRKDEHGQ 
RHVDIDMTLT APGCGMGDIL AHDVRVKVQM VPTVAEAQVN LVFTPPWSKE MMSEAAKLQV 
GLM