Gene Hhal_1921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1921 
Symbol 
ID4710629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2116514 
End bp2117290 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content71% 
IMG OID639856394 
ProductABC transporter related 
Protein accessionYP_001003487 
Protein GI121998700 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCAGG CCCAGGATCT GATCATCGAT ATCCCCGAGC GGACGGACGG CTACCCGCTC 
AACTTCGCCA TCGAGCCCGG GGAGGTGTGG GGCGTCCTCG GTCCCAACGG CGCCGGCAAG
ACCACGCTGC TGCACACCCT GGCCGGGTTG CGCGCGCCCC GCGCCGGCGT GGTTCAGCTC
GACGGCGTCA GCCTGCGTCG CTGGCGGCGC AAGGCCCTGG CCCGGCGCCT GGGGGTGGTC
TTCCAGGAGC GCCACGACGG CTTCCCCGCC TCGGTGCTGG AGACCGCCCT GATCGGGCGT
CACCCCTACC TGACCCCGTG GGATCTGGAG ACCGCCGAGG ACTTGACCTG TGCCCGGCAG
GCCCTGGAGC GGCTGGAGCT CGGTGCCCTG GAGGAGCGGC TGGTCAGTAC CCTTTCCGGC
GGCGAGCGCC AACGCCTGGC GATGGCCACG GTGCTGGCCC AGGACCCGGC CGTGTGGCTG
GCTGATGAGC CCACCAACCA CCTCGATCTT CGCCACCAGG TGGCCGTCAT GGATCTGCTC
GCCGGCCAGG CCCGGGAGGG GCGCGGGGTC TTTCTCTGCC TGCACGACAT CAACCTCGCG
GCGCGCTGGT GTACGCACAT CCTGCTGCTC TACCCCAACG GCGATGCCTG CTGGGGGCCG
ACCGGGGTGA TGCTGGTCAC CGAGGCGCTG GAACAACTCT ACGGCCAGCG GTTGGTGGCG
ACCGAAGCCG ACGGTGCGCG GGTCTTCGTG CCCGCCGGCG GGATGCCGTG CGCTTGA
 
Protein sequence
MLQAQDLIID IPERTDGYPL NFAIEPGEVW GVLGPNGAGK TTLLHTLAGL RAPRAGVVQL 
DGVSLRRWRR KALARRLGVV FQERHDGFPA SVLETALIGR HPYLTPWDLE TAEDLTCARQ
ALERLELGAL EERLVSTLSG GERQRLAMAT VLAQDPAVWL ADEPTNHLDL RHQVAVMDLL
AGQAREGRGV FLCLHDINLA ARWCTHILLL YPNGDACWGP TGVMLVTEAL EQLYGQRLVA
TEADGARVFV PAGGMPCA