Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1921 |
Symbol | |
ID | 4710629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 2116514 |
End bp | 2117290 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639856394 |
Product | ABC transporter related |
Protein accession | YP_001003487 |
Protein GI | 121998700 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGCAGG CCCAGGATCT GATCATCGAT ATCCCCGAGC GGACGGACGG CTACCCGCTC AACTTCGCCA TCGAGCCCGG GGAGGTGTGG GGCGTCCTCG GTCCCAACGG CGCCGGCAAG ACCACGCTGC TGCACACCCT GGCCGGGTTG CGCGCGCCCC GCGCCGGCGT GGTTCAGCTC GACGGCGTCA GCCTGCGTCG CTGGCGGCGC AAGGCCCTGG CCCGGCGCCT GGGGGTGGTC TTCCAGGAGC GCCACGACGG CTTCCCCGCC TCGGTGCTGG AGACCGCCCT GATCGGGCGT CACCCCTACC TGACCCCGTG GGATCTGGAG ACCGCCGAGG ACTTGACCTG TGCCCGGCAG GCCCTGGAGC GGCTGGAGCT CGGTGCCCTG GAGGAGCGGC TGGTCAGTAC CCTTTCCGGC GGCGAGCGCC AACGCCTGGC GATGGCCACG GTGCTGGCCC AGGACCCGGC CGTGTGGCTG GCTGATGAGC CCACCAACCA CCTCGATCTT CGCCACCAGG TGGCCGTCAT GGATCTGCTC GCCGGCCAGG CCCGGGAGGG GCGCGGGGTC TTTCTCTGCC TGCACGACAT CAACCTCGCG GCGCGCTGGT GTACGCACAT CCTGCTGCTC TACCCCAACG GCGATGCCTG CTGGGGGCCG ACCGGGGTGA TGCTGGTCAC CGAGGCGCTG GAACAACTCT ACGGCCAGCG GTTGGTGGCG ACCGAAGCCG ACGGTGCGCG GGTCTTCGTG CCCGCCGGCG GGATGCCGTG CGCTTGA
|
Protein sequence | MLQAQDLIID IPERTDGYPL NFAIEPGEVW GVLGPNGAGK TTLLHTLAGL RAPRAGVVQL DGVSLRRWRR KALARRLGVV FQERHDGFPA SVLETALIGR HPYLTPWDLE TAEDLTCARQ ALERLELGAL EERLVSTLSG GERQRLAMAT VLAQDPAVWL ADEPTNHLDL RHQVAVMDLL AGQAREGRGV FLCLHDINLA ARWCTHILLL YPNGDACWGP TGVMLVTEAL EQLYGQRLVA TEADGARVFV PAGGMPCA
|
| |