Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1856 |
Symbol | cobS |
ID | 4709064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 2027795 |
End bp | 2028547 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639856328 |
Product | cobalamin synthase |
Protein accession | YP_001003422 |
Protein GI | 121998635 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0368] Cobalamin-5-phosphate synthase |
TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.656817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCT TGCGACCGCT GCTGATCGCC ATCACCTTTC TCACGCGCCT GCCAGTGCCC TCGCTCGGCC GTATCGACGA CGAACAGACC GGTGCCTCGC TGGTCGCCTA CCCGCTGGTC GGCGCGATCA TCGGCACGCT GCTCATCCTG GTGGCCTTCG CCACCAGCCC CCTGCCCGCG CTGCTCACCG CTGCCCTGGT GGTGGTGCTC TGGGCGTCGC TCACCGGGGC CCTGCACCTG GACGGCCTGG CGGATACCGC AGACGCCTGG GTTGGCGGGC TGGGGCAGCG CGAGCGCACC CTGGAGATCA TGAAGGATCC CTCCTGCGGA CCGATCGGGG TCACCGCGAT CATCGCCGTG CTGTTGCTCA AAGTGGCCGC GGTAGCGGCC CTGCTCGATG CCGGCAGCGT GCTGGCCATC GCCACGGCAG CGGTGGTCGG CCGCGCCGGA CTGACCCTAC TCTTCCTGAC CACCCCTTAC GTCCGGCCCG GCGGCATCGG CGAGGCCCTG TCGCACTTCG GGCCGCCGGG GGCCTCACTG GGCAGCGCGG CAGTGGTCAC CGCCCTGGCC GCCCTGCTCA CCGGCTGGGC CGGGCTGGCC GCCGTAGCCG CCGGAGCCGT GACCCTGGTC CTGGCACAGC ACGCCATGTC ACGGCGGATC GGGGGGACCA CCGGCGACAC CGCCGGCGCC ACCGTCGAGC TCACCGAGAC CGCAGCACTG CTCGGTGCCG CCGCCGTCGC GGCGAGCCTC TAG
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Protein sequence | MTALRPLLIA ITFLTRLPVP SLGRIDDEQT GASLVAYPLV GAIIGTLLIL VAFATSPLPA LLTAALVVVL WASLTGALHL DGLADTADAW VGGLGQRERT LEIMKDPSCG PIGVTAIIAV LLLKVAAVAA LLDAGSVLAI ATAAVVGRAG LTLLFLTTPY VRPGGIGEAL SHFGPPGASL GSAAVVTALA ALLTGWAGLA AVAAGAVTLV LAQHAMSRRI GGTTGDTAGA TVELTETAAL LGAAAVAASL
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