Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1711 |
Symbol | |
ID | 4710256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 1870003 |
End bp | 1873545 |
Gene Length | 3543 bp |
Protein Length | 1180 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639856178 |
Product | hypothetical protein |
Protein accession | YP_001003277 |
Protein GI | 121998490 |
COG category | [S] Function unknown |
COG ID | [COG4717] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGACTGC GCCGGATCCA GATCCTGCGT CTGCCCGGGA TCGACCCGGG CTTCACCGTA GAGGGCATGG GCGACGGGCT GCAGTTGATT GTCGGCCCCA ACGCCTCGGG CAAGAGCAGT CTGATCCGCG CCCTGCACGC CCTGCTCGAA CCGGGCCGAC GCATGACCGG CACGGTGCAC CTGGAAGCGG ACATCGACAC GGCTACCGGC CCGATGCAGG TGGTCAGGAT CGGCGACCGA GTCACCTGGT ATCGGGATGG CGCCCCGGCC GATCCGCCTG CACTGCCGCC CCCACACCTG CTCGACTGCT ACGCCCTGCA GGTGGAAGGG CTCACCGATC CGGGTGCCAC CGACGCCGAG ATCGGTCGGG CGCTCGTCCG CGAGCTTGCC GGCGGCTACG ATCTGGCCGC GCTGACCGCC CAGCGCGGCC CGTTCCATAT CAAGCGCAAT CACGGCGAAA CCGAGGCACG TACCCTGGAA CAGGCACGCA GCCAGTGGCG GGAGCGGCGG CAGGAACATG AAGCCCTGAT CGCCGACGAG CAGCGCCTGG CCGACCTGGA AACGGCTTAC CGGGCTGCCG AGCAGGCCCG GCACGAGGCC GAGCAACTGC GTCAGGCCGC CGAGCTGGCG GCGGCCCGGG CCGAACTGGA ACAGATCGAT GACCGGCTGG CCCATTTCCC GGCCGAGATG AACCGGCTCC ATGGCGACGA ACTCCAGCGC CTGGAACAGG AAGAGGCAGC CCTTGCCCGA CTCCGCACCG AGCAAGAGAA ACTCGCCGAG GCGGAACGGG CCGCCACCCG ACAACTGACC GAGACCCGAC TGCCCGAAGC CGCCCCCGAT GCCGAGACCC TGCAGCGCCA CCGCCAGCTG CTGCGCGAAC TCAGCGAGCG CGAGCGGGAG TGCCGCCAGG CCGAGGAGGA TATCGCGGCC GCCCGGCAGC GGCAGCAGGA ACTCGCCGAG GCCCTGGGCG TACCAGAACC CGCCGCCGTG CGCATCGACC CGACGGCGCT GCGCACCCTG GAGGAGCAGC TCGAACCATA CCAGCGCGCC GAGGCGGAAC TGACGGCCCT GGATCGGGAG CTGGCCCGCC TCTCCGACCC GGACCACCCC CGCCTGCCCC GGGCAGAGAC CGTGCGGACC GGCCGCCGCG AACTCATCCA CTGGCTCAGC GCCCGCAAAC CGCCCCGCCC GGGGATCCTG GGCGGTACCG CCGGGGTACT GGGCATGGCC GCACCGCCGA CGCTGGTCGG CACCCTACTG TGGCTGGAGC CACAGTGGCA GTGGCATCCC GGCTGGGTGG CAGCGGGCCT GGGTGCCACC GCTGCCCTGA GCTACGCGGC CAGCACCGTA CTCCGCGCCC CGCAGGCCGA CGCCCTGCGC GACGCAGCCC GCCGGCGCTA CCCCACCGAG CTGCCCCAGC CCAGCGCCTG GGAGCACGAC CCCGTGGGCA CCTGCCTGGA GCAGCTCGAT ACCCTGCTCC ACGCTGCCGA GCGGCGCGAG CAGCACAGCC AGCGCGCCGC CGAACAGCAA CGGTGCAAGC GGGAGTTGCA GCGGCTGCGC GAGGATCTCT CGCGCCGCGC CCGCCAGCTC GGCGGCGACG GCAACCGGTT GGCAGCGAGC ACCCTGCATT ACCTGCAGAG CCTGCGCGAC TGGAACCAGG CCGCCGCCGA GCGGGCCGAG GCTGAGGCCC GGCGCGAGGC GCGCCAAGGC GAAGCCGAGC GCCTGCGCAC CGAGGTCAGC GGCTTTCTCA CCTCCTGGCA CTCCTTACCC CCGGACGGCA GCGACGACGT TGAGGCCCTG ATCGCCGCCG TCGACGGATT GGCCAACCGA GCCCAACAGC GCACCGAGGC GCTTCGCCAG CACCAGGACG TGGAGCGATG GCGAGCCGAC CTCCTGCGGC AAGTCGACGA GCGGCGCGCG GCCATCGAGC AGCTGTTCGC CCGGGCCGGC CTGCCCGACG GGGATCGGGA CACCCTCCGC CAGCGCCTGG AGCAGCGCCC CGACTGGCAA CAGCTCCAGG AACATCGCCA CCAGTGGCAG GCCGAGGCAC AAGCGGCCCG CCGCGCCCTG GCCGATGCCA ACGAGCTGCT GCAGCGCGCC GAGCAGACCT CCGCCGAGAC CCTGCACGCC GAGGCCAGCG ATCGCCTGGC ACGGGCCGGC GACGCACAGC AGATCAGCGA GACCATCGGT TCAATCCGCC AGCGGATTCA CTACGTCCAG CAGACACGCC CGCTGGAGCA CACCCGCGCC GAGATCCAGC AGGCCGGCGA TGCACTGGCC GAACGGCTCG ACGAGGCACT GATCGCCTGC GCGGGCCGCT GGCTGGTGGA CGACGTCCGC CAGGAACACA CCAGCGAGCG CCGGCCCGAC GCACTGCGCC GCGCCGAGGG GTGGCTGCAC CGGTTCACCG ACTACCGGTA CACCCTGCGC TTCCTTCCCG ACGCCGAGGG CAACGGCCGG TTCCTGGCCC ACGACCAGCA TGCCGGCGCC GACCGCAGCC TCGCCGAACT GTCCACGGGC ACGCGCATGC AGCTGCTGCT CGCCGTCCGG GTCGCCTTTG CGCTGGAAGC GGAACGCGGC CGAGAACCCC TGCCCCTGTT CCTCGACGAG GCCCTCACCA CCACCGACCG CGAGCGCTTC AGCGCCGTGG CCGAGGCGCT GGCCACCCTG GCCGAGGAGG ATCGGCGACA GGTCTTTTAC CTAAGCGCGC AGGCCGCCGA GCCACAGCTC TGGCATCAAG TCGGCATCGA CCCACCGGTG ATCGACCTAG CGGAAGTCCG CCGCCTGGCC CGGGGCAGCG CCTCCGCCGA AGGCCTCGCG CTGCCGCCCC GTCCGACGCC CGCGGAGCCC CAGGACCACA CCGCTGCAAG CTACGGAGCC GCCATCGGTG CCCCCTGGAT CGACCCCTGG CAGGACATCG GTCAGGTCCA CCTGTTCCAT CTGCTGCGTG ACGACCTCGA GCGATTGCAC CGGATTCTCA ACGCCGGTTT CGAGTATCTG GGCCCGCTGC GCGGCCTGCT GAGCAGCGAC GCTGCCCGGA CCCTCTTCAC CGAGGAAGAG GCCAACGATC TGCGGGTCCG GCTTGTCGTC GCCGAGGCGT GGCAGGAGGC CTACACCATC GGTCGCGGCT TCCCCATCGA CCGCGCCACC CTGGCCGCGG CAACACCGAT CGCCGGCAGC ACCCTGCGTG ATGACGTGGC CCAACTGGCC GAGACCCACG GCGGCGACGC CGCCGCCATC CTCGAGGCAT TGCAGAACAA GGCAGTCTCC GGGTTCCGGA CGCGCAAGAT CGGCGAACTC CGCGACTGGC TGGAACAGCA CGGCTATCTC GACCCGCGCC CACCCAGCCG CCGCGAGGAC CGGCTGCAGC GCGCCTTGGT CGCCGCCGGC GGGGCGATCC ACGAGGGGAC CGTCACGACC AGCCAGGTTC GGGGCTGGGT CGATCAACTG GAGGCTGGGC TGGCGCCGGA GGGCGACGGG GCAGCGGCGA CCCGGGCACT GGCCACCTCC ACGCAACGGG GAACGGCGGA GGCCCCCTCG TGA
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Protein sequence | MRLRRIQILR LPGIDPGFTV EGMGDGLQLI VGPNASGKSS LIRALHALLE PGRRMTGTVH LEADIDTATG PMQVVRIGDR VTWYRDGAPA DPPALPPPHL LDCYALQVEG LTDPGATDAE IGRALVRELA GGYDLAALTA QRGPFHIKRN HGETEARTLE QARSQWRERR QEHEALIADE QRLADLETAY RAAEQARHEA EQLRQAAELA AARAELEQID DRLAHFPAEM NRLHGDELQR LEQEEAALAR LRTEQEKLAE AERAATRQLT ETRLPEAAPD AETLQRHRQL LRELSERERE CRQAEEDIAA ARQRQQELAE ALGVPEPAAV RIDPTALRTL EEQLEPYQRA EAELTALDRE LARLSDPDHP RLPRAETVRT GRRELIHWLS ARKPPRPGIL GGTAGVLGMA APPTLVGTLL WLEPQWQWHP GWVAAGLGAT AALSYAASTV LRAPQADALR DAARRRYPTE LPQPSAWEHD PVGTCLEQLD TLLHAAERRE QHSQRAAEQQ RCKRELQRLR EDLSRRARQL GGDGNRLAAS TLHYLQSLRD WNQAAAERAE AEARREARQG EAERLRTEVS GFLTSWHSLP PDGSDDVEAL IAAVDGLANR AQQRTEALRQ HQDVERWRAD LLRQVDERRA AIEQLFARAG LPDGDRDTLR QRLEQRPDWQ QLQEHRHQWQ AEAQAARRAL ADANELLQRA EQTSAETLHA EASDRLARAG DAQQISETIG SIRQRIHYVQ QTRPLEHTRA EIQQAGDALA ERLDEALIAC AGRWLVDDVR QEHTSERRPD ALRRAEGWLH RFTDYRYTLR FLPDAEGNGR FLAHDQHAGA DRSLAELSTG TRMQLLLAVR VAFALEAERG REPLPLFLDE ALTTTDRERF SAVAEALATL AEEDRRQVFY LSAQAAEPQL WHQVGIDPPV IDLAEVRRLA RGSASAEGLA LPPRPTPAEP QDHTAASYGA AIGAPWIDPW QDIGQVHLFH LLRDDLERLH RILNAGFEYL GPLRGLLSSD AARTLFTEEE ANDLRVRLVV AEAWQEAYTI GRGFPIDRAT LAAATPIAGS TLRDDVAQLA ETHGGDAAAI LEALQNKAVS GFRTRKIGEL RDWLEQHGYL DPRPPSRRED RLQRALVAAG GAIHEGTVTT SQVRGWVDQL EAGLAPEGDG AAATRALATS TQRGTAEAPS
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