| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1703 |
|---|
| Symbol | |
|---|
| ID | 4710103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 1858514 |
|---|
| End bp | 1859335 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639856170 |
|---|
| Product | redoxin domain-containing protein |
|---|
| Protein accession | YP_001003269 |
|---|
| Protein GI | 121998482 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCT TGAATCAGAC CGTCGCCTTG GGGCCTTTGG TGCTCTCCAT TGGCCAGATC
CTGCTCATCC TGGCGCTGGT GGTCGCCCTG ATCGCCGGTG GCCTGGCTGC CCGGCGCAGC
GGTGTGAGCG TTAGTGACAG CCTGTTCAGC CTGGTGCTGG TGGGTCTGGT GGGGGCGCGG
GTGCTGTTCG TGTTCCACTA CTGGGAGAGC TTCGAAAGCC TGTGGGGGGT GGTGGATATC
CGCGATGGCG GGTTCGACCC TGTCGGCGGC GTCGTGGCCG GCCTGGCCTA CCTGGCCTGG
CGGTTCTGGC GGTCGCCGCA GCAGCGCCGC GCCCTGGTCA CGGCGGTGGT GGCCGGCGGC
ATCGTCTGGG GGGTGACGGC GGGCCCGCTG CTGGTCATCG ACCAGCAGTC CCGTTCCGTG
CCGGACGTGG CGGTGAGCAC CCTCGAAGGC GAGCATACGG ATCTGCCCGC CTTGATTGAG
GAGACCGGGA AGCCGGTGGT GGTCAACCTG TGGGCGACCT GGTGTCCGGC GTGCCAGCAG
GAGAAGCCGG TCTTCGAGCA GGCGCAGGAG CGCGAGGACG GGGTCAAGTT CGTCTTCGTC
AACCAGGGTG AGGACGCCGG GCAGGTCCAG GGGTATCTGG AGGAGCATGC GCCGTCGCTG
GACAATATCC TGATGGATCC CCATCAGCGC TGGAGCGACG CCACCGGTAC CCGCGGCCTT
CCGGCCACCT TTTTCTATGA TGAGCAGGGC CAATTGGTGG ATTCCCACAC CGGCCAGGTT
TCCAGCGCCT CGCTGGAGAG CGGTCTGGAA CGGCTGCGCT GA
|
|---|
| Protein sequence | MSALNQTVAL GPLVLSIGQI LLILALVVAL IAGGLAARRS GVSVSDSLFS LVLVGLVGAR
VLFVFHYWES FESLWGVVDI RDGGFDPVGG VVAGLAYLAW RFWRSPQQRR ALVTAVVAGG
IVWGVTAGPL LVIDQQSRSV PDVAVSTLEG EHTDLPALIE ETGKPVVVNL WATWCPACQQ
EKPVFEQAQE REDGVKFVFV NQGEDAGQVQ GYLEEHAPSL DNILMDPHQR WSDATGTRGL
PATFFYDEQG QLVDSHTGQV SSASLESGLE RLR
|
|---|
| |