Gene Hhal_1684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1684 
Symbol 
ID4709222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1838859 
End bp1839692 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content68% 
IMG OID639856151 
Productpeptidase M23B 
Protein accessionYP_001003250 
Protein GI121998463 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACTG AACCACCGTG CTGCGCCCCC CGGAAAGCGC TCATCGCCTT GGCCACGGCA 
GCCGGGCTGC TTCTCACCGA TCCGCTCGAC GCCGCGCCCC TGCCCGACTG GCCCGTCCCC
GGCGGCGTGG CCCGGGTCGC CCTGGATACC GACAGCCGTC CGGACGAAGT GCGCTACGAC
GACGAACCGG TCATGGTGCG ATCGACCCCG GAAGGCTGGC AGGCCCTGGT GGGGATCGAC
CTGGACGCCG AGCCGGGCAC CCACACCCTG AAGGTCGACG GCGAGCCCCT CGCCTTTGAG
GTCCAGCCCA TCGACTACGA AGAACAGCAC CTGACCATCG ACGACGAAGA CATGGTCTCA
CCGCCGGAGG AGACCCTCGA GCGGATCTGG GCGGAACAGC GCGAGATCCG CGCCGCCTTC
CGCAGCCGAG AGGTCGACGC GCAGCCACAC CTGCGCCTGC ACACCCCCGT GGCCGAGCAC
CGGATCTCGG CCACCTTCGG CTTGCAGCGC TTTCTCAACG GCGAACCCCG CAATCCGCAC
AACGGGCTCG ATATGGCCGC CCCCACCGGC ACCCCCATCG AGGCGGCCGA GGCCGGCCGG
GTGGTCGAGA CCGGGGATTA CTACTTCAAC GGCAAGACTG TGTTCATCGA TCACGGCGCC
GGACTGGTCA CCATGTACTG CCATCTGGAC GAGATCGACG TCGACACCGG GCAGTGGGTG
GAACGCGGAG AACCGATCGG CACCGTCGGC GAGACCGGAC GGGTCACCGG GCCTCATCTG
CACCTGAGCG TTATCCTCAA CGGCAACACC GTAGACCCCA ACCTATTCCT CTAG
 
Protein sequence
MPTEPPCCAP RKALIALATA AGLLLTDPLD AAPLPDWPVP GGVARVALDT DSRPDEVRYD 
DEPVMVRSTP EGWQALVGID LDAEPGTHTL KVDGEPLAFE VQPIDYEEQH LTIDDEDMVS
PPEETLERIW AEQREIRAAF RSREVDAQPH LRLHTPVAEH RISATFGLQR FLNGEPRNPH
NGLDMAAPTG TPIEAAEAGR VVETGDYYFN GKTVFIDHGA GLVTMYCHLD EIDVDTGQWV
ERGEPIGTVG ETGRVTGPHL HLSVILNGNT VDPNLFL