Gene Hhal_1621 details

Gene Information

• Locus tag: Hhal_1621
• Symbol: bchD
• ID: 4709660
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 1768118
• End bp: 1769995
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639856086
• Product: magnesium chelatase subunit D
• Protein accession: YP_001003187
• Protein GI: 121998400
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1240] Mg-chelatase subunit ChlD
• TIGRFAM ID: [TIGR02031] magnesium chelatase ATPase subunit D

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.893519
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCTG CGCTCGATTA CAACAGTGCC GAGTCGGCCT GGGAGGATGC GGCGACTGCG 
GCGGCGTTGC TGGCGATCGA CCCGCCCGGT GTGGGGGGCG TCTGCCTGCG TTCACTGCCC 
GGGCCGGTGC GCGACCGCTG GGTCCAGATC GCGCGTGAGC TGCTGCCCGC AGAGACGCCG 
TGGCGCCGCA TCCCGATCAA TATCTCAGAT AGTCGCCTGC TTGGTGGCCT GGATTTGACG 
GCCACGCTCC GCTCCGGCCG GCCGGTGGTG GAGCGGGGTG TGCTGGCCGA GGTCGATGGC 
GGCGTGGCCG TTTTGGCCAT GGCCGAGCGC ATCGCCCCGG CCACCGCTGG CAAGCTCGGG 
GCGGTGCTCG ATAACGGCGA GGTCCGGCTG GAGAGGGACG GCCTGGCCGA GCGGATGACG 
AGCCGCTTCG GGGTGATCGC CCTGGATGAG GGCGCCGAAG AAGACGAGCG GCCGGTGGGG 
CCGCTTCGCG ATCGGCTGGG GTGCCACCTC GATCTCAACG GGATCCCGGT GCATGTCGCC 
GGCGGCTGTG AGTACACGGC CGATGACGTG GCGGCGGCGC GGGACCGTCT GGACCAGGTC 
CATTGCTCCG ATGAGTTGGC CGAGGCCCTG TGTGCCGGTG GGCTGGCGCT GGGTATCGGC 
TCATTGCGGG CCCCGCTGCA GGCATTGCGT GCTGCCCGGG CGGCAGCTGC ACTGGCCGGG 
CGGACGGAAG TGACCCAGGA GGACGTGGCG CTCGCAACGC GACTGATCCT GGTGCCGCGG 
GCCACCCGCA TCCCGGAGAT GCAACAGCCG GAAGAAGAAC AGCCCGAGGA GCAGCAGGAG 
ACCCAGGAGA CTGAGCAGCA GGAGCAGGAA GAGCCGCCCC CGCCGCCGGA GCAGGAGGAC 
GACGAGCGTC CTGATGAGGA GGATGGCGGT GAGCAAGACG AAGACGATCA GGGGCAGGAC 
GAGGATGAGG ACGAGGAGCA GGCGCCGGCG GAAATCCCGG CAGAGCTCGT GCTGGATGCT 
GCAAGAGCGG TGCTCCCCGA TAACCTGCTC CAGCAGATGA AAATTCGCGA GCTGGCTCAG 
CGCAACCGGT CGCAGACGCC GGGGCGTGCC GGTGCCCTGC AGCAGGGGGG CGGGCGCGGC 
CGCCCGGCCG GGGTGCGAGC AGGCAACCCG GGTGGGGGTG CGCGACTGAA TGTGGTTGAG 
ACGCTGCGCA CGGCGGCTCC TTGGCAGCCG CTGCGGCGGG AGCACGATCA GACGGGGCGG 
CGGGTCATTG TCCGCCCCGA GGATTTCCGG GTTACCCGCT TCAAGCAGCG CAGTCAGACG 
ACGACGATCT TCGCGGTGGA TGCCTCGGGA TCTTCGGCCA TGCACCGGCT TTCGGAGGCC 
AAGGGTGCGG TGGAGCTGCT GTTGGCCGAG TGCTATGTGC GCCGGGATGA GGTGGCGCTG 
GTTGCCTTCC GGGGGCGGGG GGCCGAAGTG CTGCTGCCTC CGACGCGTTC CCTGACCCGG 
GCCAAGAAGG GGCTTGCCGG GTTGCCGGGG GGAGGCGGGA CGCCACTGGC TGCGGGCATC 
GATACCGCGC GGCAGCTCAC CGGCGAAGTG CGCCGCAAGG GAGCCACCCC GGTGTTGATC 
CTGCTCACCG ACGGCCGTGC CAATGTCACC CGGGAAGGCC TCGGTGGCCG CGACAAGGCG 
CAGCAGGAGG CCACCGAGGC CGCCCGTGCC ATCCGCGTGA TGGGGATCCG GGCATTGGTG 
GTGGATACCT CGCCGCGACC GCGTCCGATG GGCCGTGAGT TAGCCGAAGC GATGGGAGCA 
GACTATCTGC CGCTGCCGCG AGCTGATGCC TCTTCGATCA GTTCGGCAGT GCAGGCAGTG 
ACCGGTACGG GGCGCTAG 

 

Protein sequence

MSAALDYNSA ESAWEDAATA AALLAIDPPG VGGVCLRSLP GPVRDRWVQI ARELLPAETP 
WRRIPINISD SRLLGGLDLT ATLRSGRPVV ERGVLAEVDG GVAVLAMAER IAPATAGKLG 
AVLDNGEVRL ERDGLAERMT SRFGVIALDE GAEEDERPVG PLRDRLGCHL DLNGIPVHVA 
GGCEYTADDV AAARDRLDQV HCSDELAEAL CAGGLALGIG SLRAPLQALR AARAAAALAG 
RTEVTQEDVA LATRLILVPR ATRIPEMQQP EEEQPEEQQE TQETEQQEQE EPPPPPEQED 
DERPDEEDGG EQDEDDQGQD EDEDEEQAPA EIPAELVLDA ARAVLPDNLL QQMKIRELAQ 
RNRSQTPGRA GALQQGGGRG RPAGVRAGNP GGGARLNVVE TLRTAAPWQP LRREHDQTGR 
RVIVRPEDFR VTRFKQRSQT TTIFAVDASG SSAMHRLSEA KGAVELLLAE CYVRRDEVAL 
VAFRGRGAEV LLPPTRSLTR AKKGLAGLPG GGGTPLAAGI DTARQLTGEV RRKGATPVLI 
LLTDGRANVT REGLGGRDKA QQEATEAARA IRVMGIRALV VDTSPRPRPM GRELAEAMGA 
DYLPLPRADA SSISSAVQAV TGTGR