| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1599 |
|---|
| Symbol | |
|---|
| ID | 4709623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 1739600 |
|---|
| End bp | 1740703 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639856064 |
|---|
| Product | surface antigen (D15) |
|---|
| Protein accession | YP_001003165 |
|---|
| Protein GI | 121998378 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCACC GCGCTCGCCG CCTCCTGGCT GCTCTGGTCA TCGGTCTGGT CTGCGCGCCC
GGCCCCCTGT CCGCCGGCTC GCCGGGGGGC GTGGTCGTGC CGTTGGTCTT CTACACCCCG
GAGACCGGCG TAGCCGGCGG CGCCACGGCG GTTGCCTTCC GCCAGCGCAC ACTGACTACG
GGTGCCGAGG GCAGCGACAC GCTCAGTCTG GTCGGGTTCT ATACAGCAGA ACGCCAGTAT
CTGGCCGCCG TCAGCGGCCG CGCCTACTTC GCGGATGGGC GGTGGCTGGT CGCCAACAGC
ACGACCCTCA GCGAGTTTCC CCGGGATTAC TACGGGCAGG GCCGCCTCAG CAGCGAGGCT
GACGAAGAGT CGTACACCCC GCTTCGGCGC AGCAACAGCC TGCGCCTGCA GCGGTGGATC
GGCGGCCCCT GGTACGCCGG TGTGCGCTGG GACGCCGGTC GTTACGACCT GGAAGACGTG
GAGGCAGGCG GCGAGGTGGA GGCGTATTAC GAGGACCGCC GACTCCCGGA GGAGAACCGC
CTGCACGGGC TCGGTGCCGT CCTCTCCCAG GATACCCGCA GCGGCCCGTT CTTCCCCACC
GCCGGCAGCC GCACGGAACT CGCCGCAGTG GCCTTCCCCG AAGGCTTCGG GGCCGATCAG
TCATTCAGCA CCCTGGAGCT CGACCACCGC CACTATCTCG GCATCGGCGA ACGGCACGCG
GTAGCGCTGC AGTTCGTCGG CGAATACGCC GGCGATGACG CCCCCCTGCC CTTCCAGCCC
CGGCTCGGCG GAACCAGCCT GCGAGGATTC TACGAGGGCC GATACACCGA CAACGTGTTG
CTCGCCGGAC AGGCCGAGTG GCGATTCCCC ATCGCCCGGC GCTGGCAGGG TGCCGCCTTC
GTGGGCGCCG GTGAGGTCTT CCCGAGTCTG TCCGACGCCT CGACCGAGCA CCTGAAGTAC
GGCCTCGGCG GCGGTCTGCG ATACGTGCTC GTACCGGACG CGGGCATCCA CCTGCGTCTC
GACTTCGCCC GCGGGTACGC CCGGGGGGCG GCCGAGGATG GCGACGGCCT GGCCGTCTAT
TTCAACCTGG GCGAGGCGTT CTGA
|
|---|
| Protein sequence | MAHRARRLLA ALVIGLVCAP GPLSAGSPGG VVVPLVFYTP ETGVAGGATA VAFRQRTLTT
GAEGSDTLSL VGFYTAERQY LAAVSGRAYF ADGRWLVANS TTLSEFPRDY YGQGRLSSEA
DEESYTPLRR SNSLRLQRWI GGPWYAGVRW DAGRYDLEDV EAGGEVEAYY EDRRLPEENR
LHGLGAVLSQ DTRSGPFFPT AGSRTELAAV AFPEGFGADQ SFSTLELDHR HYLGIGERHA
VALQFVGEYA GDDAPLPFQP RLGGTSLRGF YEGRYTDNVL LAGQAEWRFP IARRWQGAAF
VGAGEVFPSL SDASTEHLKY GLGGGLRYVL VPDAGIHLRL DFARGYARGA AEDGDGLAVY
FNLGEAF
|
|---|
| |