Gene Hhal_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1568 
Symbol 
ID4711393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1708337 
End bp1709416 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content57% 
IMG OID639856032 
Producthypothetical protein 
Protein accessionYP_001003134 
Protein GI121998347 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5653] Protein involved in cellulose biosynthesis (CelD) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCA GATACCCGTG GACTGTCGAG CGACTCGACT TGAACTCCAA CGAGCTTCTC 
CCCGATGACT GGCAGCGACT CAATCAACGC TGTTGTGGCG CCCACCCGCT GTTATCCGCC
GATTTCTTCA CCGCTCTGCT CCGCCACTTT CCTGGCGAAG ACGTCTACCT AGCCGCGCTG
CATGATCGCG AGCTACCGAT CGCTATGGCG CTGTTAACCC CCCTCACCGC GATGCGCTGG
GCACTCTACC ATCCGAGCCA GGCCCCTTTG GGACCCATCC TGCTCGATTC GTCACAAGTG
GATCCCGATC GCGCCCTGGC AGACCTCCTC GATACCCTAC CGGGGCAGAC CCTGCAACTG
GATTTAACTC AGCTAGATCC CACTTTTTTC CCTGTGGCGT TCGACTCGAA TCGAGTCGAG
AGGATCCACT ATGTCACGAC TATGGCGGTA TCCCCTGAGG GCAGCTTCGA AACATACTTA
AGCAACCGAC CGCGCAAGTT ACGCTCCAAC CTGCGACGCT ACCGGCGCCG ACTCGAAGAG
GCAGGCATGC AAATCGAACT GAAGTGCCTG ACCGACCCGC AGGCGGTAGC AGAGACAGTC
GATGAGCACG GCAGATTGGA GAGTTCCGGA TGGAAGGGTG AAATCGGCAC GGCCATGCGC
CCGGACAACT CTCAAGGACG ATTTTATCGT GACTTGATGA AAGATCATGC ATATGAGGGT
AAGGGGTGGG TTTATTGTCT AAACGTCGAC GGCAGCATTG CCGCCACTTG GCTGGTCATC
CGAGGCGGTG GCATGATCTC GATGCTAAAA ACCGCCTATG ATGAATCCCT TGCCAAGTAC
TCAGTGGGTC GAGTCCTCCT AGTTGAGACC TTGGAGGAGT TGTTTAAGAT CGATGGCGTC
CAAAGCATAG AGTTCTACAC GAATGCCAAT GCGGATCAAC TGGAGTGGGC GACGGATAGC
CGTTCGATCG AGCACCTCAA TTTTTACCGC CACCAGGCCG TACAGCGGTC ACGTGCGGCG
GCACGCCGGG CAAACCAGGT ATTCAGGCAG ATCCAGGCCG TTTGGAAGCG AAAACCTTGA
 
Protein sequence
MSTRYPWTVE RLDLNSNELL PDDWQRLNQR CCGAHPLLSA DFFTALLRHF PGEDVYLAAL 
HDRELPIAMA LLTPLTAMRW ALYHPSQAPL GPILLDSSQV DPDRALADLL DTLPGQTLQL
DLTQLDPTFF PVAFDSNRVE RIHYVTTMAV SPEGSFETYL SNRPRKLRSN LRRYRRRLEE
AGMQIELKCL TDPQAVAETV DEHGRLESSG WKGEIGTAMR PDNSQGRFYR DLMKDHAYEG
KGWVYCLNVD GSIAATWLVI RGGGMISMLK TAYDESLAKY SVGRVLLVET LEELFKIDGV
QSIEFYTNAN ADQLEWATDS RSIEHLNFYR HQAVQRSRAA ARRANQVFRQ IQAVWKRKP