Gene Hhal_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1553 
Symbol 
ID4710203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1689452 
End bp1689883 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content65% 
IMG OID639856017 
Producthypothetical protein 
Protein accessionYP_001003119 
Protein GI121998332 
COG category[S] Function unknown 
COG ID[COG2246] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGACT TCTTCTCGCA GCAGTTCCTG CTCTTCCTGC TGACCGGGGG GATCGCGGCC 
GTCGTCAATT TCGGCAGCCG GATCGTCTAC AGCCTGTTCA TGGGGTATTC GGCGGCGATC
GTTACCGCCT ACATCACCGG CATGATCACC GCCTACGTGC TGGCGCGCCT TTTCGTCTTC
CGCTCCCCCC AGGTGCGTAC GGTGCGCTCG GCGGTCTGGT TCACACTGGT CAACGTCGCC
GCCGTCGCCC AGACCTGGGC CGTCAGTGTC GCCCTCGCCT ACTACCTCCT ACCGGCGGCC
GGCGTGGAAG CATTCCGCGA GGAGATCGCC CACGCCGTCG GCATCGCGGT ACCGGTCTTC
TCCAGTTTCC TCGGGCACAA GTACCTCTCC TTCGCAACGC CAGCTGCACG GGACTCGAAG
CAACCTCGCT GA
 
Protein sequence
MRDFFSQQFL LFLLTGGIAA VVNFGSRIVY SLFMGYSAAI VTAYITGMIT AYVLARLFVF 
RSPQVRTVRS AVWFTLVNVA AVAQTWAVSV ALAYYLLPAA GVEAFREEIA HAVGIAVPVF
SSFLGHKYLS FATPAARDSK QPR