Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1423 |
Symbol | |
ID | 4709986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 1537218 |
End bp | 1538063 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639855890 |
Product | putative outer membrane protein |
Protein accession | YP_001002992 |
Protein GI | 121998205 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0426224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCGAG ACCTCAACCG CTGCAAGGAA ACTCCAGGCC GCCCGCGCTG GCGCGGCATG ACCACACTGC TCCCGGCGCT CCTGCTCGCC GCCCCGTGGG CGGGGGCCGA CGAGGGGCAC GATACCGATG TCGCCGAGAT CGTCGAACGA GCCAACCTGG CCGCCTACTA CGCCGGGGAG GATGGCCGCT CCGAGGCGCG CATGCGGATC GTGGATGACC GCGACCGGAC CCAGACCCGG CAATTCACCA TCCTTCGCCG GGATGTCGAG GACGGCGGCG ATCAGCAATA CCTGGTCGCC TTCAGCCGCC CCTCCGAGTT CCGCGGGGTC GTCTTCTTGG TCGAGAAACA CCCCGGCGGC GATGATGACC GCTGGCTCTA CCTGCCGGAC CAGGATCTGG AACGCCGCAT CGCTCCGGGC GACAAGCGGA CCAGCTTCGT CGGGTCTCAC GTCTTCTATG AGGACGTCTC CGGCCGCCAC CTGGAGGACG ACGACCACGA GCTGATCGAG GTCACCGACG AGCACTACCA GGTGCGCTCG ACCCCGCGGG ACGATAGCAA CGTGGAGTTC GCGGCCTACA CGACATGGAT CGACCGCGAT ACCTACCTGC CCCTGATCAC CGAGTACGAG GACAGCGACG GCAGCGTCTA CCGCCGTATC GAGAGTTCCG ACGTCGAGGA GATCGACGGC TACCCCACCG CGATGCGCAT GCGTGTCGAA GACGAACGCA TGGGCGGCCA TACGGAGGTC CAGTTCCGCG GTCAGGAGTA CGACCTGGGG CTCCCTGAGA GCGTCTTCAC CCAGCGCAGC CTGCGTAACC CGCCCCGCGA CTGGTTAGGG AGGTAG
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Protein sequence | MDRDLNRCKE TPGRPRWRGM TTLLPALLLA APWAGADEGH DTDVAEIVER ANLAAYYAGE DGRSEARMRI VDDRDRTQTR QFTILRRDVE DGGDQQYLVA FSRPSEFRGV VFLVEKHPGG DDDRWLYLPD QDLERRIAPG DKRTSFVGSH VFYEDVSGRH LEDDDHELIE VTDEHYQVRS TPRDDSNVEF AAYTTWIDRD TYLPLITEYE DSDGSVYRRI ESSDVEEIDG YPTAMRMRVE DERMGGHTEV QFRGQEYDLG LPESVFTQRS LRNPPRDWLG R
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