Gene Hhal_1423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1423 
Symbol 
ID4709986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1537218 
End bp1538063 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content67% 
IMG OID639855890 
Productputative outer membrane protein 
Protein accessionYP_001002992 
Protein GI121998205 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0426224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCGAG ACCTCAACCG CTGCAAGGAA ACTCCAGGCC GCCCGCGCTG GCGCGGCATG 
ACCACACTGC TCCCGGCGCT CCTGCTCGCC GCCCCGTGGG CGGGGGCCGA CGAGGGGCAC
GATACCGATG TCGCCGAGAT CGTCGAACGA GCCAACCTGG CCGCCTACTA CGCCGGGGAG
GATGGCCGCT CCGAGGCGCG CATGCGGATC GTGGATGACC GCGACCGGAC CCAGACCCGG
CAATTCACCA TCCTTCGCCG GGATGTCGAG GACGGCGGCG ATCAGCAATA CCTGGTCGCC
TTCAGCCGCC CCTCCGAGTT CCGCGGGGTC GTCTTCTTGG TCGAGAAACA CCCCGGCGGC
GATGATGACC GCTGGCTCTA CCTGCCGGAC CAGGATCTGG AACGCCGCAT CGCTCCGGGC
GACAAGCGGA CCAGCTTCGT CGGGTCTCAC GTCTTCTATG AGGACGTCTC CGGCCGCCAC
CTGGAGGACG ACGACCACGA GCTGATCGAG GTCACCGACG AGCACTACCA GGTGCGCTCG
ACCCCGCGGG ACGATAGCAA CGTGGAGTTC GCGGCCTACA CGACATGGAT CGACCGCGAT
ACCTACCTGC CCCTGATCAC CGAGTACGAG GACAGCGACG GCAGCGTCTA CCGCCGTATC
GAGAGTTCCG ACGTCGAGGA GATCGACGGC TACCCCACCG CGATGCGCAT GCGTGTCGAA
GACGAACGCA TGGGCGGCCA TACGGAGGTC CAGTTCCGCG GTCAGGAGTA CGACCTGGGG
CTCCCTGAGA GCGTCTTCAC CCAGCGCAGC CTGCGTAACC CGCCCCGCGA CTGGTTAGGG
AGGTAG
 
Protein sequence
MDRDLNRCKE TPGRPRWRGM TTLLPALLLA APWAGADEGH DTDVAEIVER ANLAAYYAGE 
DGRSEARMRI VDDRDRTQTR QFTILRRDVE DGGDQQYLVA FSRPSEFRGV VFLVEKHPGG
DDDRWLYLPD QDLERRIAPG DKRTSFVGSH VFYEDVSGRH LEDDDHELIE VTDEHYQVRS
TPRDDSNVEF AAYTTWIDRD TYLPLITEYE DSDGSVYRRI ESSDVEEIDG YPTAMRMRVE
DERMGGHTEV QFRGQEYDLG LPESVFTQRS LRNPPRDWLG R