| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1379 |
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| Symbol | |
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| ID | 4711355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1486648 |
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| End bp | 1488000 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639855846 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_001002948 |
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| Protein GI | 121998161 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.918562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCTGA CACGCCGTGC CGTCTACTTC GCGCCCTGCC TGCTCGCCCT CGGCGGCATC
GCCACCAGCG CCCACGGCGC CGCCTTCCAG CTCCAGGAGC AGAGCGCCTC GCTGCTCGCC
AGCGCCTTCG CCGGGCGCAG CGCCGACGCC GGGGACATCA GCCACATGTT CTTCAACCCC
GCCACCCTGG GGGTCCACGC CGGCCGCGGC CCCGAGGCCG AGCTGGTGCT GAGCTACATC
GACCCGACCT TCGACTTTGA GGCAGACAGC GACCCTGGCT GGAGTGCGGT TGGCGGTGAC
ACCGGCCAGC TGAGTGCCAG CGGCGGCGAG AGCGCCCTGG CCCCGGTCTT CTACGCCGGC
TTCGACCTGG CCCCGGACCT GCGCGCCGGC CTCGGCATCA ACGTCCCCTA CGGCCTGGAG
ACCGACTACC CCGAGGACTG GGTGGGCCGC TACGACGCCG TCAACACCGA TCTGGTCACC
GTCGACATCA ACCCGCAGCT CGGCTGGCGG TTGGACGAGC AGCTCGCCCT GGGCCTCGGG
GTGTCGGCCC AGTACGCCGA TGCGACGTTG TCCACAATGG CGCCGGAGAC AGATTTTTCT
ACAACGCCTG CAACACCAAC ACCAACACCA ACACCAGCTA ACGACGGGAA ACTCACCGTC
GACGGCGACA GCTGGTCGTA TAGCTTCAAC CTGGGCGCCC ACTACGCCGT CACCGAGGAC
ACCCAACTCG GCGTCGCCTA CCGCCACGGC CTCGGCCATA CCCTCTCCGG CGAGGCGGAG
TTAGTGGATG ATGGGGGTGT CACCGTGGAT GAGACCGGTG GCGAGGCGGA TCTGGATATC
CCGGCCAGCC TCAACCTCGG CGTCAGCCAC CAGCTGGACC CGCAATGGAC CCTGCTCGCC
GACGCCACCT GGACCCAGTG GAGCGATTTC GAGGAGCTCG CCATTGAGTT CGATGACGGT
ATTGTCGGAA TTCCTCAGGG ACAAAATTCC TACGCAGTTA CTGACGAGCA GGCCTACGAA
GAATACGACT GGGACGACAC CTGGTTCCTC TCCCTGGGCA CCCGCTACGA CGCCAGCGAG
CAGTGGGACC TGCGGGCCGG CCTCGCCTAC GACCAGACCC CCACCGGCGA CAGCAACCGC
ACGCCGCGCA TCCCCGACGA GGACCGCACC TGGCTGGCCG TCGGCGGTAC CTGGTCCCCC
GCCCAGGCCG ATCAGCTCCG CGTCGACTTC GGCTACACCT ACATCTGGCT CGACGACGCC
GACATCGAGG TAGCCGAGGA CTTCGGTGGC GTCACCGGCG AGTACGAGTC CAACGTCCAG
GTCTTCACCA CCTCGGCCAA CTGGCGCTTC TAG
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| Protein sequence | MRLTRRAVYF APCLLALGGI ATSAHGAAFQ LQEQSASLLA SAFAGRSADA GDISHMFFNP
ATLGVHAGRG PEAELVLSYI DPTFDFEADS DPGWSAVGGD TGQLSASGGE SALAPVFYAG
FDLAPDLRAG LGINVPYGLE TDYPEDWVGR YDAVNTDLVT VDINPQLGWR LDEQLALGLG
VSAQYADATL STMAPETDFS TTPATPTPTP TPANDGKLTV DGDSWSYSFN LGAHYAVTED
TQLGVAYRHG LGHTLSGEAE LVDDGGVTVD ETGGEADLDI PASLNLGVSH QLDPQWTLLA
DATWTQWSDF EELAIEFDDG IVGIPQGQNS YAVTDEQAYE EYDWDDTWFL SLGTRYDASE
QWDLRAGLAY DQTPTGDSNR TPRIPDEDRT WLAVGGTWSP AQADQLRVDF GYTYIWLDDA
DIEVAEDFGG VTGEYESNVQ VFTTSANWRF
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