| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1368 |
|---|
| Symbol | |
|---|
| ID | 4711342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 1476106 |
|---|
| End bp | 1476555 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639855835 |
|---|
| Product | CcmE/CycJ protein |
|---|
| Protein accession | YP_001002937 |
|---|
| Protein GI | 121998150 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2332] Cytochrome c-type biogenesis protein CcmE |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC GACACCAGAG GCTGTTCTTG GTACTCGGTG TGGTCGCCGG GGTCAGTGTC
GCCACGGCGC TGGTTCTCAA CGCCTTCCGT GACAACATGA CCTTCTTCAT CACGCCGTCC
GAGGTGATGG CCAAGTCCGA CATGCCCGAG CGGCACTTCC GCATCGGCGG GCTGGTCGAG
GACGGCTCCG TGGAGCGTGA CAGCGACTCC ACGCAGGTCC GCTTCCGGGT CACCGACACC
GAGGCGAGCG TACCCGTCGA CTTCGAGGGC ATCCTCCCCG ACCTCTTCCG CGAGGGTCAG
GGCGTGGTTG TCGAGGGCCG GATCACCTCC AACGGGGTGT TCAAGGCGGA CAACGTCATG
GCGCGTCACG ACGAGGACTA CATGCCGGCC GAGGCACAAG AGGCCCTGGA CCGGGTCGAA
CACTCCGTCG ATGAAGTCGG GGACTACTAA
|
|---|
| Protein sequence | MKKRHQRLFL VLGVVAGVSV ATALVLNAFR DNMTFFITPS EVMAKSDMPE RHFRIGGLVE
DGSVERDSDS TQVRFRVTDT EASVPVDFEG ILPDLFREGQ GVVVEGRITS NGVFKADNVM
ARHDEDYMPA EAQEALDRVE HSVDEVGDY
|
|---|
| |