| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1358 |
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| Symbol | |
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| ID | 4711030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1467551 |
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| End bp | 1468789 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639855825 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001002927 |
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| Protein GI | 121998140 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCCT TACAACGCCT GCTCAGTTCC GCCTGGCTGC TCCACCTGCT GGTGCTAGCC
GCCCTGGCAG GCTGGATCCT CGTGCTCAAC GCCCCGTTCC CGCGCCCCGC GGTCGCGCTG
CTGGAGGCCC ACCAGCTGGA GATTCTTGGC GTCGGGGGCG GCCTCGTGGC CGTGCTGGCG
CTGCTCTACC GGCGCGCCAA CCTGGCCCTC CAGGCGGCGG TCATCAGCCT GTCGATCGCT
GGCCTGGGCG TAGCGCCCTC ACCTGCCCAC GGCGTCACAG CCGCTGCCAT CCTCTTGCCG
ATCAATATCC TGATCCTGGC GCTACTCGAC GAACGCGGTC TGCTAAGCCG GGATGGGCTG
TGGCGCTGCG CGGCCCTGGT GCTGCAGGTC CTGCTGGTGC TGGGCCTTTT CCGCCACCAG
CCGGCTTGGC TGGAGGCCCT GGCGGCGACG CATTTCCTGC CTGCGGCCGT CAGCAGCTGG
AGCAGTCTAC CCGACCAGGG CCTGCTGCTC GGCGTCCTGG CCGTTGCCGG CCTGCTCTCC
TGGGCCCTGC TCCACCCCAA CCCGCCCCAT ATCGGCGCCT TCAGCGCGCT GGTCACGGCA
ACCGTCGGCC TGGAGCTGAG CCTGATGCGC CACGGGAGCC TGGTGCTGCC TACCCTGCTG
GCCGTCGTCG CCCTCCACCT GCTGCTCTTC GCCGTGTTGC AGGAGGCCCA CCGCATGGCC
TTCCGTGATG GGCTCACCGG CTTGCCCAAC CGGCGCGCTA TGGACACCCT GACGCAGGGG
CTGAGCGGCC GCTACACCAT CGCCATGATG GACATCGACC ACTTCAAGGC GTTTAACGAT
ACCTACGGGC ACGAGATCGG CGACCAGGTG CTGCGCCGTG TAGCCTCAAA TATCGGCCGT
GTCGGCGCAG GCGGCCGGCC CTTCCGCTAC GGCGGTGAGG AGTTCTCCGT GGTCTTTCCG
GGCCGCAGCC CGGATGAGGC TGTCGGGGCA CTGGAGGCCG TGCGCCAGGC GATCGCCGAC
ACCCCGTTTC GCCTGCGCAG CGCCGACCGG CCGGCGGACG ATAAGCGTGG CAGTCGCGAA
CGCTCGGGCC AGCGGGGTGA GCAGGAGACC CGGATTACCA TCAGCATCGG CGTCGCCGAG
CCCGAATCCA CCTCGGCGAG CGCCGACGAC GTCGTCCAGG CCGCCGACCA GGCGCTTTAC
CGGGCCAAGA AGGGCGGACG CAACCGCCTG GCTCGGTAG
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| Protein sequence | MAALQRLLSS AWLLHLLVLA ALAGWILVLN APFPRPAVAL LEAHQLEILG VGGGLVAVLA
LLYRRANLAL QAAVISLSIA GLGVAPSPAH GVTAAAILLP INILILALLD ERGLLSRDGL
WRCAALVLQV LLVLGLFRHQ PAWLEALAAT HFLPAAVSSW SSLPDQGLLL GVLAVAGLLS
WALLHPNPPH IGAFSALVTA TVGLELSLMR HGSLVLPTLL AVVALHLLLF AVLQEAHRMA
FRDGLTGLPN RRAMDTLTQG LSGRYTIAMM DIDHFKAFND TYGHEIGDQV LRRVASNIGR
VGAGGRPFRY GGEEFSVVFP GRSPDEAVGA LEAVRQAIAD TPFRLRSADR PADDKRGSRE
RSGQRGEQET RITISIGVAE PESTSASADD VVQAADQALY RAKKGGRNRL AR
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