Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1354 |
Symbol | |
ID | 4710910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1462848 |
End bp | 1463963 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639855821 |
Product | periplasmic binding protein |
Protein accession | YP_001002923 |
Protein GI | 121998136 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCGTC ATCCGTGCAT CGCGCTCGTC GCGGGGATCG GTTTGATCCT CGGCGGGTGC GGAGATACCC CCAACGACGA AAGCCGCGAT GGGCCCGCGC AGGATACCCA TGAGGTCGAG GATATGCTCG GCCGCAGCGT GGAAGTTCCG GAGGCGGCGG AGCGGATCGC CACGGTCAAT GTCGATGCCT TCCGCATGGC GCTGCACCTG GGTGTCGAGG ATCGCCTGGT CGGAATCCCC AGCGACATGT TCGGCTCGCG CTTTTCCGAG GCCAAGCCGA TCGAAGTCCG CGCCTTCGGT CGCCTGGACG AGGTGGCCAT GGTCGGCGGC GGCCAGCCCG GGTCGGAGTT CAGCGCCGAG CGGGTGCTCG CCACCGATCC GGATCTGTTC ATCTACTGGG CCTTCAGCCG CGGCGACGAC GACGAGGCGA TGGCCGAGCA GGCCGAGCGC TACCAGCAGC AGCTCGGCGT CCCCGTGGTC GCGGTGAATA CCCTGGGCCG CGAGCGGGCC TCCGAGGAGG CCATTGAGGC GCAGATCGAG CAGGCCTATC GGCTGCTCGG CACCGTGACC GGTCGCGAAG AGCGGGCGGA AGAACTGCTC GATTTCTACG ATGCGACGGT CTCCGAGGTG CAGGAGCAGG TCGCCGACGA GGAACCGCCA CGGATCTACC TGGCCCACCG GCGCAACCTC TACAACCACG TCTCCTTCTA CTTTCCCGTC GAGCAGCTGG GTGCCGAGCT GGTGACCGCT GGTCGGCCCG GTGGTGACGG CGAGGTCAGC GCCGAGGAGC TGGTGAGCTG GGATCCGGCG CACATCTTCC TCCACACCCC GTCCCGGGCC AGCCGCGTCG CCCGTGACGA GGTCCTGGAT GATGAACGGC TCTCCGGGGT AAAGGCCGTC GAGGCGGAAC GCATCCACCG CTTCAAGGGC ACCTACATGG GGTGGGATCT GGCCACCGGG CTGATCGACC TGGTGCACAT GGCCCGGGTG CTCTACCCGG AGGCTATGGC CGACGTCGAT CTCCGGGATC GCGGTGAGGA GATCCTGGAG GTCTTCTACG GCGACCCCGG GCTGTACGAT CGGCTCCAGG AGCTCAGCAG CCTGGACGAT GACTGA
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Protein sequence | MQRHPCIALV AGIGLILGGC GDTPNDESRD GPAQDTHEVE DMLGRSVEVP EAAERIATVN VDAFRMALHL GVEDRLVGIP SDMFGSRFSE AKPIEVRAFG RLDEVAMVGG GQPGSEFSAE RVLATDPDLF IYWAFSRGDD DEAMAEQAER YQQQLGVPVV AVNTLGRERA SEEAIEAQIE QAYRLLGTVT GREERAEELL DFYDATVSEV QEQVADEEPP RIYLAHRRNL YNHVSFYFPV EQLGAELVTA GRPGGDGEVS AEELVSWDPA HIFLHTPSRA SRVARDEVLD DERLSGVKAV EAERIHRFKG TYMGWDLATG LIDLVHMARV LYPEAMADVD LRDRGEEILE VFYGDPGLYD RLQELSSLDD D
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